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SRX9956731: Lake Constance metagenome
1 ILLUMINA (NextSeq 500) run: 58M spots, 17.4G bases, 6.4Gb downloads

Design: Metagenomic DNA library was prepared with NEBNext Ultra DNA Library Prep Kit for Illumina (New England Biolabs GmbH, Frankfurt am Main, Germany) with size selection for 300-400 bp fragments. Sequencing was performed with the NextSeq 500/550 Mid Output Kit v2.5 (300 cycles; 2 x 150 bp; Illumina, San Diego, USA) on a NextSeq500 sequencer
Submitted by: University of Constance
Study: Lake Constance metagenome
show Abstracthide Abstract
Lake Constance is the largest lake in Germany with a volume of 48 km3 and a maximum depth of 250 m. It is oligotrophic and has a permanently oxygenated hypolimnion throughout the year and serves as a drinking water reservoir for more than 5 million people. Samples were taken in 85m depth and was pre-filtered through a 70 and 30 micron nylon mesh and filtered on board onto 5 and 0.2 micron polycarbonate filters. DNA was extracted from 0.2 micron filters to obtain genomic DNA for metagenome sequencing.
Sample:
SAMN17601185 • SRS8131323 • All experiments • All runs
Library:
Name: Lake_Constance_Sep_2018
Instrument: NextSeq 500
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 58M spots, 17.4G bases, 6.4Gb
Run# of Spots# of BasesSizePublished
SRR1355845058,006,54617.4G6.4Gb2022-02-08

ID:
13017338

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