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SRX10162693: WGS of C. parvum BGF: oocysts
1 OXFORD_NANOPORE (MinION) run: 2.5M spots, 20.6G bases, 16.5Gb downloads

Design: ONT library prepared with ligation kit
Submitted by: The University of Georgia
Study: Cryptosporidium parvum strain:IOWA-ATCC Genome sequencing and assembly
show Abstracthide Abstract
A new C. parvum genome sequence assembly was generated using both high coverage short and long-read sequencing platforms, resulting in a nearly-complete genome sequence, that is free of gaps or ambiguous bases (“N's”). It consists of 8 chromosomes including 13/16 telomeres. A comparative manual curation of all genes in the context of existing molecular evidence and synteny was performed using a local installation of WebApollo2.
Sample:
SAMN18047655 • SRS8314350 • All experiments • All runs
Library:
Name: BGF_UGA_19
Instrument: MinION
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Runs: 1 run, 2.5M spots, 20.6G bases, 16.5Gb
Run# of Spots# of BasesSizePublished
SRR137771232,502,53820.6G16.5Gb2021-02-24

ID:
13290269

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