WGS data of Solanum gracilifrons: collected from Leaf - SRA

SRX13266644: WGS data of Solanum gracilifrons: collected from Leaf
1 ILLUMINA (Illumina NovaSeq 6000) run: 137.4M spots, 41.2G bases, 12.6Gb downloads

Design: The genomic DNA collected from each sample was randomly sheared into small fragments. The generated fragments were end repaired, A-tailed and Illumina adapter was ligated. Following PCR amplificatin of the the fragments, they were size selected, and purified.

Submitted by: McGill University

Study: Genome sequencing of Solanum genomes and the cold regulated transcriptome of a cold tolerant Solanum species

PRJNA779368 • SRP348693 • All experiments • All runs

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Assembly of nuclear and organelle genomes of each sequenced individual of potato, along with annotation and structural variation analysis. Differential expression analyses of selected individuals will be carried out to identify potential cold regulation.

Sample: CIP761498.010

SAMN23440988 • SRS11188326 • All experiments • All runs

Organism: Solanum gracilifrons

Library:

Name: grc1498_Illumina

Instrument: Illumina NovaSeq 6000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 137.4M spots, 41.2G bases, 12.6Gb

Run	# of Spots	# of Bases	Size	Published
SRR17078437	137,392,779	41.2G	12.6Gb	2023-03-14

ID:: 18147730

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Sequence Read Archive

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