Whole Genomic sequencing of Bacteria: Salmon gut - SRA

SRX15600189: Whole Genomic sequencing of Bacteria: Salmon gut
1 OXFORD_NANOPORE (PromethION) run: 323,932 spots, 2.5G bases, 2.1Gb downloads

Design: DNA extracted by Circulomcs kit. Library prepared using the exp-nbd196 native barcoding genomic DNA

Submitted by: NMBU

Study: The Salmon Microbial Genome Atlas (SMGA)

Here we described a compendium of bacterial genomes retrieved by either metagenomics or isolation approaches from Salmo salar gut.

Sample: A12

Library:

Name: A12_barcode58

Instrument: PromethION

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Runs: 1 run, 323,932 spots, 2.5G bases, 2.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR19548036	323,932	2.5G	2.1Gb	2023-07-01

Supplemental Content

SAMN28837932 (1)
SRA
NADH dehydrogenase subunit 4 (mitochondrion) [Lampanyctus reinhardti]
NADH dehydrogenase subunit 4 (mitochondrion) [Lampanyctus reinhardti]
gi|2580283550|gb|WNH24455.1|

Protein
PREDICTED: Camelus ferus F-box protein 43 (FBXO43), mRNA
PREDICTED: Camelus ferus F-box protein 43 (FBXO43), mRNA
gi|1811033620|ref|XM_006192814.2|

Nucleotide
Diaphus chrysorhynchus FAKU:151605 mitochondrial COX1 gene for cytochrome c oxid...
Diaphus chrysorhynchus FAKU:151605 mitochondrial COX1 gene for cytochrome c oxidase subunit 1, partial cds
gi|2801982397|dbj|LC802134.1|

Nucleotide

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SRA