Thaumarchaeota incertae sedis SCGC AD-613_B20 Whole Genome Sequencing - SRA

SRX19069502: Thaumarchaeota incertae sedis SCGC AD-613_B20 Whole Genome Sequencing
1 ILLUMINA (NextSeq 500) run: 7.6M spots, 2.3G bases, 834.3Mb downloads

Design: Cell was sorted by flow cytometry into 384-well plates, then lysed with cold KOH and the whole genome was amplified with Multiple Displacement Amplification. Libraries for SAG genomic sequencing were created with Nextera XT (Illumina) reagents following manufacturers instructions, except for purification steps, which were done with column cleanup kits (QIAGEN).

Submitted by: University of California, San Diego

Study: marine oxygen minimum zones single-cell and community genomes Raw sequence reads

PRJNA393056 • SRP112624 • All experiments • All runs

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Single-cell and community genomic sequence data from the Pacific Ocean oxygen minimum zones.

Sample: cellular organisms; Archaea; TACK group; Thaumarchaeota; Thaumarchaeota incertae sedis; Marine Group I

SAMN32393270 • SRS16485078 • All experiments • All runs

Organism: Nitrososphaerota incertae sedis

Library:

Name: SCGC_AD-613_B20

Instrument: NextSeq 500

Strategy: WGA

Source: GENOMIC SINGLE CELL

Selection: MDA

Layout: PAIRED

Runs: 1 run, 7.6M spots, 2.3G bases, 834.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR23118505	7,630,561	2.3G	834.3Mb	2023-01-19

ID:: 26241335

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Sequence Read Archive

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