Whole-genome sequencing of bacteria from a hospital setting - SRA

SRX21172442: Whole-genome sequencing of bacteria from a hospital setting
1 ILLUMINA (Illumina MiSeq) run: 1.5M spots, 818M bases, 455.3Mb downloads

Design: Illumina library prep using Nextera DNA UD indices

Submitted by: Brigham and Women's Hospital

Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA

PRJNA278886 • SRP056445 • All experiments • All runs

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The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.

Sample:

SAMN36729055 • SRS18433776 • All experiments • All runs

Organism: Staphylococcus lugdunensis

Library:

Name: BWH_916_S_lug

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 1.5M spots, 818M bases, 455.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR25438574	1,466,618	818M	455.3Mb	2023-07-27

ID:: 28607776

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