7C9R: STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF THIORHODOVIBRIO STRAIN 970

PDB ID: 7C9RDownload
MMDB ID: 193769
PDB Deposition Date: 2020/6/7
Updated in MMDB: 2020/10
Experimental Method:
electron microscopy
Resolution: 2.82  Å
Source Organism:
Similar Structures:
Biological Unit for 7C9R: 36-meric; determined by author
Molecular Components in 7C9R
Label Count Molecule
Proteins (36 molecules)
1
Photosynthetic Reaction Center Cytochrome C Subunit
Molecule annotation
1
L Subunit of the Reaction Center
Molecule annotation
1
Reaction Center Protein M Chain
Molecule annotation
1
Photosynthetic Reaction Center, Subunit H, Bacterial
Molecule annotation
6
Alpha Subunit 1 of Light-harvesting 1 Complex
Molecule annotation
3
Antenna Complex Alpha/beta Subunit
Molecule annotation
13
Antenna Complex Alpha/beta Subunit
Molecule annotation
1
Antenna Complex Alpha/beta Subunit
Molecule annotation
8
LHC Domain-containing Protein
Molecule annotation
1
Alpha Subunit 2 of Light-harvesting 1 Complex
Molecule annotation
Chemicals and Non-standard biopolymers (124 molecules)
1
4
PROTOPORPHYRIN IX CONTAINING FEPROTOPORPHYRIN IX CONTAINING FE
2
1
MAGNESIUM IONMAGNESIUM ION
3
17
CALCIUM IONCALCIUM ION
4
1
DIACYL GLYCEROLDIACYL GLYCEROL
5
19
(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
6
36
BACTERIOCHLOROPHYLL ABACTERIOCHLOROPHYLL A
7
2
BACTERIOPHEOPHYTIN ABACTERIOPHEOPHYTIN A
8
2
Ubiquinone-8Ubiquinone-8
9
2
OctadecaneOctadecane
10
1
FE (III) IONFE (III) ION
11
1
MENAQUINONE 8MENAQUINONE 8
12
3
CARDIOLIPINCARDIOLIPIN
13
17
(6~{E},8~{E},10~{E},12~{E},14~{E},16~{E},18~{E},20~{E},22~{E},24~{E},26~{E})-2,31-dimethoxy-2,6,10,14,19,23,27,31-octamethyl-dotriaconta-6,8,10,12,14,16,18,20,22,24,26-undecaene(6~{E},8~{E},10~{E},12~{E},14~{E},16~{E},18~{E},20~{E},22~{E},24~{E},26~{E})-2,31-dimethoxy-2,6,10,14,19,23,27,31-octamethyl-dotriaconta-6,8,10,12,14,16,18,20,22,24,26-undecaene
14
18
DODECYL-BETA-D-MALTOSIDEDODECYL-BETA-D-MALTOSIDE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303