6VFR: Crystal structure of human protocadherin 18 EC1-EC4

PDB ID: 6VFRDownload
MMDB ID: 185149
PDB Deposition Date: 2020/1/6
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.79  Å
Source Organism:
Similar Structures:
Biological Unit for 6VFR: dimeric; determined by author and by software (PISA)
Molecular Components in 6VFR
Label Count Molecule
Proteins (2 molecules)
2
Protocadherin-18
(Gene symbol: PCDH18)
Molecule annotation
Chemicals and Non-standard biopolymers (45 molecules)
1
9
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
beta-D-mannopyranosebeta-D-mannopyranose
3
4
alpha-L-fucopyranosealpha-L-fucopyranose
4
2
alpha-D-mannopyranosealpha-D-mannopyranose
5
18
CALCIUM IONCALCIUM ION
6
8
1,2-ETHANEDIOL1,2-ETHANEDIOL
7
2
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303