NCBI
National Center for
Biotechnology Information
Search
5ED9:
Crystal structure of CC1 of mouse SUN2
Citation is unavailable
PDB ID:
5ED9
Download
MMDB ID:
135506
PDB Deposition Date:
2015/10/21
Updated in MMDB:
2024/03
Experimental Method:
x-ray diffraction
Resolution:
2.009 Å
Source Organism:
Mus musculus
Similar Structures:
VAST+
Download sequence data
Molecular Graphic
?
3D view
full-featured 3D viewer
Download Cn3D
Interactions
?
Download Stucture Data
?
Download
Format:
ASN.1 (Cn3D)
PDB
XML
JSON
PNG (image)
Data Set:
alpha-Carbons
Single 3D structure
* Mouse right-click to bring up context menu
Molecular Components in 5ED9
Label
Count
Molecule
Proteins (3 molecules)
A
B
C
3
SUN Domain-containing Protein 2
(Gene symbol:
Sun2
)
3 Proteins
SS Diagram
Features
Domain Families
Specific Hits
Super Families
1
15
30
45
60
78
78 residues, click to see VAST similar structures.
helix 11-54
helix 55-69
trimer interface
trimer(29)
location: 11, residue: Q
location: 14, residue: F
location: 15, residue: Q
location: 18, residue: S
location: 21, residue: E
location: 22, residue: L
location: 25, residue: L
location: 26, residue: E
location: 28, residue: Q
location: 29, residue: L
location: 32, residue: L
location: 33, residue: R
location: 35, residue: E
location: 36, residue: L
location: 39, residue: L
location: 40, residue: T
location: 42, residue: K
location: 43, residue: Q
location: 46, residue: V
location: 49, residue: E
location: 50, residue: V
location: 53, residue: L
location: 56, residue: K
location: 57, residue: I
location: 60, residue: A
location: 61, residue: R
location: 63, residue: D
location: 64, residue: V
location: 65, residue: E
SUN2_cc1
cd21438 (11-65): coiled-coil domain 1 of SUN domain-containing protein 2 and similar proteins
SUN_cc1 superfamily
cl41753(11-65): SUN (Sad1 and UNC-84) proteins (SUN1 and SUN2) are components of the LINC (LInker of Nucleoskeleton and Cytoskeleton) complex which is involved in...
click domain graphic to toggle highlight of corresponding residues in 3D viewer
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303
You are here:
NCBI
>
Computational Biology Branch
>
Structure Group
> MMDB
Write to the Help Desk
HHS Vulnerability Disclosure