6WF2: Crystal structure of mouse SCD1 with a diiron center

PDB ID: 6WF2Download
MMDB ID: 189087
PDB Deposition Date: 2020/4/3
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 3.51  Å
Source Organism:
Similar Structures:
Biological Unit for 6WF2: monomeric; determined by author and by software (PISA)
Molecular Components in 6WF2
Label Count Molecule
Protein (1 molecule)
1
Acyl-coa Desaturase 1
(Gene symbol: Scd1)
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
2
FE (III) IONFE (III) ION
2
1
S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (9Z)-octadec-9-enethioate (non-preferred name)S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (9Z)-octadec-9-enethioate (non-preferred name)
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303