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3ARC:
Crystal Structure Of Oxygen-Evolving Photosystem Ii At 1.9 Angstrom Resolution
PDB ID:
3ARC
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MMDB ID:
89948
PDB Deposition Date:
2010/11/26
Updated in MMDB:
2011/05
Experimental Method:
x-ray diffraction
Resolution:
1.9 Å
Source Organism:
Thermostichus vulcanus
Similar Structures:
VAST+
*This structure record is obsolete.
Molecular Components in 3ARC
Label
Count
Molecule
Proteins (38 molecules)
A
a
2
Photosystem Q(b) Protein
B
b
2
Photosystem II Core Light Harvesting Protein Cp47
C
c
2
Photosystem II Core Light Harvesting Protein Cp43
D
d
2
Photosystem II Reaction Center D2 Protein
E
e
2
Cytochrome B559 Subunit Alpha
F
f
2
Cytochrome B559 Subunit Beta
H
h
2
Photosystem II Reaction Center Protein H
I
i
2
Photosystem II Reaction Center Protein I
J
j
2
Photosystem II Reaction Center Protein J
K
k
2
Photosystem II Reaction Center Protein K
L
l
2
Photosystem II Reaction Center Protein L
M
m
2
Photosystem II Reaction Center Protein M
O
o
2
Photosystem II Manganese-stabilizing Polypeptide
T
t
2
Photosystem II Reaction Center Protein T
U
u
2
Photosystem II 12 KDA Extrinsic Protein
V
v
2
Cytochrome C-550
Y
y
2
Protein Ycf12
X
x
2
Photosystem II Psbx Protein
Z
z
2
Photosystem II Reaction Center Protein Z
Chemicals and Non-standard biopolymers (269 molecules)
1
2
Ca-mn4-o5 Cluster
2
2
Fe (ii) Ion
3
6
Chloride Ion
4
2
Bicarbonate Ion
5
70
Chlorophyll A
6
4
Pheophytin A
7
22
Beta-carotene
8
4
2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone
9
8
1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol
10
12
1,2-distearoyl-monogalactosyl-diglyceride
11
37
Glycerol
12
38
Unknown Ligand
13
12
Dodecyl-beta-d-maltoside
14
7
Calcium Ion
15
17
Heptyl 1-thiohexopyranoside
16
10
Digalactosyl Diacyl Glycerol (dgdg)
17
10
1,2-dipalmitoyl-phosphatidyl-glycerole
18
4
Protoporphyrin Ix Containing Fe
19
2
Magnesium Ion
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303