txid562[Organism:noexp] AND (complex_dna[filt]) AND (structure_cdd_sup - Structure - NCBI

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Select item 2427931.

Molecular Structure Image for 1X9W

T7 DNA polymerase in complex with a primer/template DNA containing a disordered N-2 aminofluorene on the template, crystallized with dideoxy-ATP as the incoming nucleotide[TRANSFERASE/ELECTRON TRANSPO...

Taxonomy:: Escherichia phage T7, Escherichia coli, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 1
modified:: 2024-02-22

MMDB ID:: 242793
PDB ID:: 1X9W

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 2427922.

Molecular Structure Image for 1X9S

T7 DNA polymerase in complex with a primer/template DNA containing a disordered N-2 aminofluorene on the template, crystallized with dideoxy-CTP as the incoming nucleotide[TRANSFERASE/ELECTRON TRANSPO...

Taxonomy:: Escherichia phage T7, Escherichia coli, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 1
modified:: 2024-02-22

MMDB ID:: 242792
PDB ID:: 1X9S

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 2427913.

Molecular Structure Image for 1X9M

T7 DNA polymerase in complex with an N-2-acetylaminofluorene-adducted DNA[TRANSFERASE/ELECTRON TRANSPORT/DNA]

Taxonomy:: synthetic construct, Escherichia coli, Escherichia phage T7

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 1
modified:: 2024-02-22

MMDB ID:: 242791
PDB ID:: 1X9M

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 2427854.

Molecular Structure Image for 1T8E

T7 DNA Polymerase Ternary Complex with dCTP at the Insertion Site[transferase/electron transport/DNA]

Taxonomy:: synthetic construct, Escherichia coli, Escherichia phage T7

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 7
modified:: 2024-02-22

MMDB ID:: 242785
PDB ID:: 1T8E

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 2427835.

Molecular Structure Image for 1SL2

Ternary 5' complex of T7 DNA polymerase with a DNA primer/template containing a cis-syn thymine dimer on the template and an incoming nucleotide[TRANSFERASE/ELECTRON TRANSPORT/DNA]

Taxonomy:: Escherichia phage T7, Escherichia coli, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 4
modified:: 2024-02-22

MMDB ID:: 242783
PDB ID:: 1SL2

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 2427826.

Molecular Structure Image for 1SL1

Binary 5' complex of T7 DNA polymerase with a DNA primer/template containing a cis-syn thymine dimer on the template[TRANSFERASE/ELECTRON TRANSPORT/DNA]

Taxonomy:: Escherichia phage T7, Escherichia coli, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 1
modified:: 2024-02-22

MMDB ID:: 242782
PDB ID:: 1SL1

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 2427817.

Molecular Structure Image for 1SL0

Ternary 3' complex of T7 DNA polymerase with a DNA primer/template containing a disordered cis-syn thymine dimer on the template and an incoming nucleotide[TRANSFERASE/ELECTRON TRANSPORT/DNA]

Taxonomy:: Escherichia phage T7, Escherichia coli, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 2
modified:: 2024-02-22

MMDB ID:: 242781
PDB ID:: 1SL0

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 2427808.

Molecular Structure Image for 1SKW

Binary 3' complex of T7 DNA polymerase with a DNA primer/template containing a disordered cis-syn thymine dimer on the template[TRANSFERASE/ELECTRON TRANSPORT/DNA]

Taxonomy:: Escherichia phage T7, Escherichia coli, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 1
modified:: 2024-02-22

MMDB ID:: 242780
PDB ID:: 1SKW

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 2427799.

Molecular Structure Image for 1SKS

Binary 3' complex of T7 DNA polymerase with a DNA primer/template containing a cis-syn thymine dimer on the template[TRANSFERASE/ELECTRON TRANSPORT/DNA]

Taxonomy:: Escherichia phage T7, Escherichia coli, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 1
modified:: 2024-02-22

MMDB ID:: 242779
PDB ID:: 1SKS

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 24277810.

Molecular Structure Image for 1SKR

T7 DNA Polymerase Complexed To DNA Primer/Template and ddATP[TRANSFERASE/ELECTRON TRANSPORT/DNA]

Taxonomy:: synthetic construct, Escherichia coli, Escherichia phage T7

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 4
modified:: 2024-02-22

MMDB ID:: 242778
PDB ID:: 1SKR

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 24276711.

Molecular Structure Image for 1MTL

Non-productive MUG-DNA complex[HYDROLASE/DNA]

Taxonomy:: synthetic construct, Escherichia coli

Proteins:: 2
Nucleic acids:: (DNA)
modified:: 2024-04-03

MMDB ID:: 242767
PDB ID:: 1MTL

View in iCn3D PubMed Proteins Conserved Domains

Select item 23460012.

Molecular Structure Image for 1ZAY

PURINE REPRESSOR-HYPOXANTHINE-MODIFIED-PURF-OPERATOR COMPLEX[TRANSCRIPTION/DNA]

Taxonomy:: Escherichia coli, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 2
modified:: 2023-08-26

MMDB ID:: 234600
PDB ID:: 1ZAY

View in iCn3D Similar Structures Proteins Conserved Domains PubChem Compound

Select item 23457313.

Molecular Structure Image for 1TKD

T7 DNA polymerase ternary complex with 8 oxo guanosine and dCMP at the elongation site[TRANSFERASE/ELECTRON TRANSPORT/DNA]

Taxonomy:: Escherichia phage T7, Escherichia coli, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 9
modified:: 2023-08-26

MMDB ID:: 234573
PDB ID:: 1TKD

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Select item 23457214.

Molecular Structure Image for 1TK8

T7 DNA polymerase ternary complex with 8 oxo guanosine and dAMP at the elongation site[TRANSFERASE/ELECTRON TRANSPORT/DNA]

Taxonomy:: Escherichia phage T7, Escherichia coli, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 9
modified:: 2023-08-26

MMDB ID:: 234572
PDB ID:: 1TK8

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 23370515.

Molecular Structure Image for 1BUA

STRUCTURAL AND ENERGETIC ORIGINS OF INDIRECT READOUT IN SITE-SPECIFIC DNA CLEAVAGE BY A RESTRICTION ENDONUCLEASE[hydrolase/DNA]

Taxonomy:: synthetic construct, Escherichia coli

Proteins:: 2
Nucleic acids:: (DNA)
modified:: 2023-08-02

MMDB ID:: 233705
PDB ID:: 1BUA

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 23223016.

Molecular Structure Image for 8SPU

Structure of ESRRB nucleosome bound OCT4 at site c[TRANSCRIPTION/DNA]

Taxonomy:: Homo sapiens, Escherichia coli

Proteins:: 11
Nucleic acids:: (DNA)
modified:: 2024-02-07

MMDB ID:: 232230
PDB ID:: 8SPU

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 23222917.

Molecular Structure Image for 8SPS

High resolution structure of ESRRB nucleosome bound OCT4 at site a and site b[TRANSCRIPTION/DNA]

Taxonomy:: Homo sapiens, Escherichia coli

Proteins:: 12
Nucleic acids:: (DNA)
modified:: 2023-06-29

MMDB ID:: 232229
PDB ID:: 8SPS

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 23193018.

Molecular Structure Image for 8G8Z

Cryo-EM structure of 3DVA component 1 of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase plus preQ1 ligand[TRANSCRIPTION]

Taxonomy:: Escherichia coli

Proteins:: 5
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 2
modified:: 2023-08-01

MMDB ID:: 231930
PDB ID:: 8G8Z

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 23192519.

Molecular Structure Image for 8G4W

Cryo-EM consensus structure of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase plus preQ1 ligand[TRANSCRIPTION]

Taxonomy:: Escherichia coli

Proteins:: 5
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 2
modified:: 2023-08-01

MMDB ID:: 231925
PDB ID:: 8G4W

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 23191820.

Molecular Structure Image for 8G2W

Cryo-EM structure of 3DVA component 2 of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase minus preQ1 ligand[TRANSCRIPTION]

Taxonomy:: Escherichia coli

Proteins:: 5
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 1
modified:: 2023-08-01

MMDB ID:: 231918
PDB ID:: 8G2W

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

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