BLASTP command line application. More...
#include <ncbi_pch.hpp>#include <corelib/ncbiapp.hpp>#include <algo/blast/api/local_blast.hpp>#include <algo/blast/api/remote_blast.hpp>#include <algo/blast/blastinput/blast_fasta_input.hpp>#include <algo/blast/blastinput/blastp_args.hpp>#include <algo/blast/api/objmgr_query_data.hpp>#include <algo/blast/format/blast_format.hpp>#include <util/profile/rtprofile.hpp>#include "blast_app_util.hpp"#include "blastp_node.hpp"
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Classes | |
| class | CBlastpApp |
Functions | |
| USING_SCOPE (blast) | |
| USING_SCOPE (objects) | |
| static void | s_GetMT1Cutoffs (const int word_size, Int8 &max_db_size, Int8 &min_q_size) |
| int | NcbiSys_main (int argc, ncbi::TXChar *argv[]) |
Variables | |
| USING_NCBI_SCOPE | |
Detailed Description
BLASTP command line application.
Definition in file blastp_app.cpp.
Function Documentation
◆ NcbiSys_main()
| int NcbiSys_main | ( | int | argc, |
| ncbi::TXChar * | argv[] | ||
| ) |
Definition at line 382 of file blastp_app.cpp.
References CNcbiApplicationAPI::AppMain().
◆ s_GetMT1Cutoffs()
Definition at line 96 of file blastp_app.cpp.
Referenced by CBlastpApp::Run().
◆ USING_SCOPE() [1/2]
| USING_SCOPE | ( | blast | ) |
◆ USING_SCOPE() [2/2]
| USING_SCOPE | ( | objects | ) |
Variable Documentation
◆ USING_NCBI_SCOPE
| USING_NCBI_SCOPE |
Definition at line 47 of file blastp_app.cpp.
