CSubSrcQual Class Reference

Search Toolkit Book for CSubSrcQual

#include <gui/packages/pkg_sequence_edit/srcedit_util.hpp>

Inheritance diagram for CSubSrcQual:

Collaboration diagram for CSubSrcQual:

Public Member Functions
	CSubSrcQual ()
	Constructors. More...
	CSubSrcQual (string name, bool required, bool report_missing=false, string example="")
virtual string	GetValue (const objects::CBioSource &src)
virtual string	GetFormatErrors (string value)
virtual	~CSubSrcQual ()
	Destructor. More...
Public Member Functions inherited from CSrcQual
	CSrcQual ()
	Constructors. More...
	CSrcQual (string name, bool required, bool report_missing, string example="")
virtual string	GetExample ()
void	SetExample (string example)
string	GetName (void)
bool	IsRequired (void)
bool	ReportMissing (void)
void	SetRequired (bool required)
void	SetReportMissing (bool report_missing)
virtual	~CSrcQual ()
	Destructor. More...

Private Attributes
objects::CSubSource::TSubtype	m_Subtype
vector< string >	m_BadIsolationSourceValues

Additional Inherited Members
Protected Attributes inherited from CSrcQual
string	m_Name
string	m_Example
bool	m_Required
bool	m_ReportMissing

Detailed Description

Definition at line 146 of file srcedit_util.hpp.

Constructor & Destructor Documentation

CSubSrcQual() [1/2]

CSubSrcQual::CSubSrcQual ( )

inline

Constructors.

Definition at line 150 of file srcedit_util.hpp.

CSubSrcQual() [2/2]

CSubSrcQual::CSubSrcQual	(	string	name,
		bool	required,
		bool	report_missing = false,
		string	example = ""
	)

Definition at line 206 of file srcedit_util.cpp.

References CSubSource::eVocabulary_insdc, CSubSource::GetSubtypeValue(), m_BadIsolationSourceValues, and m_Subtype.

~CSubSrcQual()

virtual CSubSrcQual::~CSubSrcQual ( )

inlinevirtual

Destructor.

Definition at line 156 of file srcedit_util.hpp.

Member Function Documentation

GetFormatErrors()

string CSubSrcQual::GetFormatErrors ( string  value )

virtual

Reimplemented from CSrcQual.

Definition at line 237 of file srcedit_util.cpp.

References NStr::EqualNocase(), CSubSource_Base::eSubtype_country, CSubSource_Base::eSubtype_isolation_source, ITERATE, m_BadIsolationSourceValues, m_Subtype, s_IsAllNumbers(), and rapidjson::value.

GetValue()

string CSubSrcQual::GetValue ( const objects::CBioSource &  src )

virtual

Reimplemented from CSrcQual.

Definition at line 224 of file srcedit_util.cpp.

References CBioSource_Base::GetSubtype(), CBioSource_Base::IsSetSubtype(), ITERATE, and m_Subtype.

Member Data Documentation

m_BadIsolationSourceValues

vector<string> CSubSrcQual::m_BadIsolationSourceValues

private

Definition at line 159 of file srcedit_util.hpp.

Referenced by CSubSrcQual(), and GetFormatErrors().

m_Subtype

objects::CSubSource::TSubtype CSubSrcQual::m_Subtype

private

Definition at line 158 of file srcedit_util.hpp.

Referenced by CSubSrcQual(), GetFormatErrors(), and GetValue().

---

The documentation for this class was generated from the following files:

• include/gui/packages/pkg_sequence_edit/srcedit_util.hpp
• src/gui/packages/pkg_sequence_edit/srcedit_util.cpp