CTrackData Class Reference

Search Toolkit Book for CTrackData

#include <objtools/readers/track_data.hpp>

Collaboration diagram for CTrackData:

Public Types
typedef std::vector< std::string >	LineData
typedef std::map< const std::string, std::string >	TrackData

Public Member Functions
	CTrackData ()
	~CTrackData ()
bool	ParseLine (const LineData &)
const TrackData &	Values () const
bool	WriteToAnnot (CSeq_annot &)
bool	ContainsData () const
string	Type () const
string	Description () const
string	Name () const
int	Offset () const
string	ValueOf (const std::string &) const

Static Public Member Functions
static bool	IsTrackData (const LineData &)

Protected Attributes
TrackData	mData

Detailed Description

Definition at line 40 of file track_data.hpp.

Member Typedef Documentation

LineData

typedef std::vector<std::string> CTrackData::LineData

Definition at line 44 of file track_data.hpp.

TrackData

typedef std::map<const std::string, std::string > CTrackData::TrackData

Definition at line 45 of file track_data.hpp.

Constructor & Destructor Documentation

CTrackData()

CTrackData::CTrackData

(

)

Definition at line 52 of file track_data.cpp.

~CTrackData()

CTrackData::~CTrackData ( )

inline

Definition at line 48 of file track_data.hpp.

Member Function Documentation

ContainsData()

bool CTrackData::ContainsData ( ) const

inline

Definition at line 56 of file track_data.hpp.

Description()

string CTrackData::Description ( ) const

inline

Definition at line 60 of file track_data.hpp.

Referenced by WriteToAnnot().

IsTrackData()

bool CTrackData::IsTrackData ( const LineData &  linedata )

static

Definition at line 59 of file track_data.cpp.

Referenced by ParseLine(), and CReaderBase::xParseTrackLine().

Name()

string CTrackData::Name ( ) const

inline

Definition at line 61 of file track_data.hpp.

Referenced by WriteToAnnot().

Offset()

int CTrackData::Offset

(

)

const

Definition at line 89 of file track_data.cpp.

References offset, NStr::StringToInt(), and ValueOf().

ParseLine()

bool CTrackData::ParseLine

(

const LineData &

linedata

)

Definition at line 67 of file track_data.cpp.

References IsTrackData(), ncbi::grid::netcache::search::fields::key, mData, NStr::Replace(), NStr::SplitInTwo(), NStr::TruncateSpacesInPlace(), and rapidjson::value.

Type()

string CTrackData::Type ( void  ) const

inline

Definition at line 59 of file track_data.hpp.

ValueOf()

string CTrackData::ValueOf

(

const std::string &

)

const

Definition at line 100 of file track_data.cpp.

References ncbi::grid::netcache::search::fields::key.

Referenced by Offset().

Values()

const TrackData& CTrackData::Values ( ) const

inline

Definition at line 53 of file track_data.hpp.

Referenced by WriteToAnnot().

WriteToAnnot()

bool CTrackData::WriteToAnnot

(

CSeq_annot &

annot

)

Definition at line 113 of file track_data.cpp.

References CUser_object::AddField(), Description(), ctll::empty(), Name(), CAnnot_descr_Base::Set(), CUser_object_Base::SetData(), CSeq_annot_Base::SetDesc(), CSeq_annot::SetNameDesc(), CSeq_annot::SetTitleDesc(), CUser_object_Base::SetType(), CAnnotdesc_Base::SetUser(), and Values().

Member Data Documentation

mData

TrackData CTrackData::mData

protected

Definition at line 68 of file track_data.hpp.

Referenced by ParseLine().

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The documentation for this class was generated from the following files:

• include/objtools/readers/track_data.hpp
• src/objtools/readers/track_data.cpp