create_needleman_wunsch_tool_manager.hpp

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#ifndef PKG_ALIGNMENT___CREATE_NEEDLEMAN_WUNSCH_TOOL_MANAGER__HPP
#define PKG_ALIGNMENT___CREATE_NEEDLEMAN_WUNSCH_TOOL_MANAGER__HPP
 
/*  $Id: create_needleman_wunsch_tool_manager.hpp 46706 2021-09-09 19:54:51Z asztalos $
 * ===========================================================================
 *
 *                            PUBLIC DOMAIN NOTICE
 *               National Center for Biotechnology Information
 *
 *  This software/database is a "United States Government Work" under the
 *  terms of the United States Copyright Act.  It was written as part of
 *  the author's official duties as a United States Government employee and
 *  thus cannot be copyrighted.  This software/database is freely available
 *  to the public for use. The National Library of Medicine and the U.S.
 *  Government have not placed any restriction on its use or reproduction.
 *
 *  Although all reasonable efforts have been taken to ensure the accuracy
 *  and reliability of the software and data, the NLM and the U.S.
 *  Government do not and cannot warrant the performance or results that
 *  may be obtained by using this software or data. The NLM and the U.S.
 *  Government disclaim all warranties, express or implied, including
 *  warranties of performance, merchantability or fitness for any particular
 *  purpose.
 *
 *  Please cite the author in any work or product based on this material.
 *
 * ===========================================================================
 *
 * Authors:  Mike DiCuccio
 *
 * File Description:
 *
 */
 
#include <corelib/ncbistd.hpp>
#include <gui/gui_export.h>
 
#include <gui/core/algo_tool_manager_base.hpp>
 
#include "create_needleman_wunsch_panel.hpp"
 
#include <gui/packages/pkg_alignment/needlemanwunsch_tool_params.hpp>
 
BEGIN_NCBI_SCOPE
 
/** @addtogroup GUI_PKG_ALIGNMENT
 *
 * @{
 */
 
class CAlignNeedlemanWunschPanel;
 
///////////////////////////////////////////////////////////////////////////////
/// CCreateNeedlemanWunschToolManager
class  CCreateNeedlemanWunschToolManager :
    public CAlgoToolManagerBase
{
public:
    CCreateNeedlemanWunschToolManager();
 
    /// @name overriding IUIToolManager functions implemented in CAlgoToolManagerBase
    /// @{
    virtual void    InitUI();
    virtual void    CleanUI();
    /// @}
 
    /// @name IExtension interface implementation
    /// @{
    virtual string  GetExtensionIdentifier() const;
    virtual string  GetExtensionLabel() const;
    /// @}
 
protected:
    /// @name overriding CAlgoToolManagerBase virtual functions
    /// @{
    virtual CAlgoToolManagerParamsPanel* x_GetParamsPanel();
    virtual IRegSettings* x_GetParamsAsRegSetting();
    virtual bool x_CreateParamsPanelIfNeeded();
    virtual CDataLoadingAppJob* x_CreateLoadingJob();
    /// @}
 
    void x_SelectCompatibleInputObjects();
 
protected:
    TConstScopedObjects          m_Objects;
    CNeedlemanWunschToolParams   m_Params;
    CAlignNeedlemanWunschPanel*  m_Panel;
};
 
 
///////////////////////////////////////////////////////////////////////////////
/// CCreateNeedlemanWunschJob
class  CCreateNeedlemanWunschJob : public CDataLoadingAppJob
{
public:
    CCreateNeedlemanWunschJob(const CNeedlemanWunschToolParams& params);
    bool ProgressCallback(const string& status, float done);
 
protected:
    virtual CConstIRef<IAppJobProgress> GetProgress() ;
    virtual void    x_CreateProjectItems(); // overriding virtual function
 
 
protected:
    CNeedlemanWunschToolParams   m_Params;
    float m_Done;
};
 
/* @} */
 
END_NCBI_SCOPE
 
#endif  // PKG_ALIGNMENT___CREATE_NEEDLEMAN_WUNSCH_TOOL_MANAGER__HPP