Search Toolkit Book for SWGSDb_Defs
#include <sra/readers/sra/wgsread.hpp>
Inheritance diagram for SWGSDb_Defs:
Public Types | |
| enum | EFlags { fIds_gi = 1<<0 , fIds_acc = 1<<1 , fIds_gnl = 1<<2 , fMaskIds = fIds_gi|fIds_acc|fIds_gnl , fDefaultIds = fIds_gi|fIds_acc|fIds_gnl , fInst_ncbi4na = 0<<3 , fInst_delta = 1<<3 , fMaskInst = fInst_ncbi4na|fInst_delta , fDefaultInst = fInst_delta , fSeqDescr = 1<<4 , fNucProtDescr = 1<<12 , fMasterDescr = 1<<5 , fMasterDescrMark = 1<<13 , fSeqDescrObj = 1<<14 , fMaskDescr = fSeqDescr|fNucProtDescr|fMasterDescr , fDefaultDescr = fSeqDescr|fNucProtDescr|fMasterDescr , fSeqAnnot = 1<<6 , fQualityGraph = 1<<7 , fMaskAnnot = fSeqAnnot|fQualityGraph , fDefaultAnnot = fSeqAnnot|fQualityGraph , fSplitQualityGraph = 1<<8 , fSplitSeqData = 1<<9 , fSplitProducts = 1<<10 , fSplitFeatures = 1<<11 , fSplitAll = fSplitQualityGraph | fSplitSeqData | fSplitProducts | fSplitFeatures , fSplitMask = fSplitQualityGraph | fSplitSeqData | fSplitProducts | fSplitFeatures , fDefaultSplit = fSplitAll , fDefaultFlags = fDefaultIds|fDefaultDescr|fDefaultAnnot|fDefaultInst|fDefaultSplit } |
| enum | EFeatLocIdType : Int1 { eFeatLocIdUninitialized = -1 , eFeatLocIdGi = 0 , eFeatLocIdAccVer , eFeatLocIdAccNoVer } |
| enum | EGBStateType { eGBStateZero = 0 , eGBStateRaw = 1 , eGBStateProject = 2 , eGBStateAll = 3 } |
| typedef int | TSplitVersion |
| typedef int | TChunkId |
Public Member Functions | |
| DECLARE_SAFE_FLAGS_TYPE (EFlags, TFlags) | |
Static Public Attributes | |
| static const TSplitVersion | kDefaultSplitVersion = 0 |
Detailed Description
Definition at line 140 of file wgsread.hpp.
Member Typedef Documentation
◆ TChunkId
| typedef int SWGSDb_Defs::TChunkId |
Definition at line 196 of file wgsread.hpp.
◆ TSplitVersion
| typedef int SWGSDb_Defs::TSplitVersion |
Definition at line 193 of file wgsread.hpp.
Member Enumeration Documentation
◆ EFeatLocIdType
| enum SWGSDb_Defs::EFeatLocIdType : Int1 |
| Enumerator | |
|---|---|
| eFeatLocIdUninitialized | |
| eFeatLocIdGi | |
| eFeatLocIdAccVer | |
| eFeatLocIdAccNoVer | |
Definition at line 179 of file wgsread.hpp.
◆ EFlags
| enum SWGSDb_Defs::EFlags |
Definition at line 142 of file wgsread.hpp.
◆ EGBStateType
| Enumerator | |
|---|---|
| eGBStateZero | |
| eGBStateRaw | |
| eGBStateProject | |
| eGBStateAll | |
Definition at line 186 of file wgsread.hpp.
Member Function Documentation
◆ DECLARE_SAFE_FLAGS_TYPE()
| SWGSDb_Defs::DECLARE_SAFE_FLAGS_TYPE | ( | EFlags | , |
| TFlags | |||
| ) |
Member Data Documentation
◆ kDefaultSplitVersion
|
static |
Definition at line 194 of file wgsread.hpp.
Referenced by SWGSCreateInfo::SWGSCreateInfo(), and SWGSCreateInfo::x_SetSplitVersion().
The documentation for this struct was generated from the following file:
- include/sra/readers/sra/wgsread.hpp
