1KCW


Conserved Protein Domain Family
CuRO_1_ceruloplasmin

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cd04222: CuRO_1_ceruloplasmin 
Click on image for an interactive view with Cn3D
The first cupredoxin domain of Ceruloplasmin
Ceruloplasmin is a multicopper oxidase essential for normal iron homeostasis and copper transport in blood. It also functions in amine oxidation and as an antioxidant preventing free radicals in serum. The protein has 6 cupredoxin domains with six copper centers; three mononuclear sites in domain 2, 4 and 6 and three in the form of trinuclear clusters at the interface of domains 1 and 6. Ceruloplasmin exhibits internal sequence homology that appears to have evolved from the triplication of a sequence unit composed of two tandem cupredoxin domains. This model represents the first cupredoxin domain of ceruloplasmin.
Statistics
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PSSM-Id: 259884
Aligned: 7 rows
Threshold Bit Score: 355.188
Created: 4-Jun-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
trinuclear CuDomain 6Domain 2
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1: trinuclear Cu binding site [ion binding site], 4 residue positions
Conserved feature residue pattern:H H H HClick to see conserved feature residue pattern help
Evidence:
  • Structure:1KCW; human ceruloplasmin binds copper at the trinuclear copper site.
    View structure with Cn3D
  • Comment:Trinuclear copper site ligands are typically one or two HxH motifs that can be in the same domain/subunit or in different domains/subunits.
  • Comment:In the human ceruloplasmin structure, the trinuclear copper binding site is formed by four HxH motifs from two different domains (domains 1 and 6).

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
1KCW_A          3 KHYYIGIIETTWDYAsdhge--kklisVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIekPVWLGFLGPIIKA 80   human
NP_571877      23 REYFFAIKEIQWDYApsgknliqnktvQQDEAARVFLERGEQRIGRVYKKAVYHQYTDATYRQEIdkPKWLGYLGPLISA 102  zebrafish
Q9BQS7         26 RVYYLGIRDVQWNYApkgrnvitnqplDSDIVASSFLKSDKNRIGGTYKKTIYKEYKDDSYTDEVaqPAWLGFLGPVLQA 105  human
NP_001098580   23 RTYYIGIREEDWNYApsrrnlinnrtiDSDEHASVFLSNSPSRIGSVYKKAVYRQYTDASYNTEIskPDWLGFLGPILRA 102  zebrafish
Q6MZM0         27 RTYYIGIVEEYWNYVpqgknvitgksfTEDKLATLFLERGPNRIGSIYKKAVYRRFTDGTYSIEIpkPPWLGFLGPILRA 106  human
XP_001235149   22 REYYIGITETAWDYApgstdlisgqrfAEEEQAEVFLKRGPQRIGSTYKKAVYTQYTSTLYDVIVekPSWLGFLGPIIKG 101  chicken
XP_002937375   22 RIFYIGIRETNWDYApsgnniisgtsiKDDEDAQTFLVGGPDRIGRVYKKAVYLQYSDDSYSKEIkkPQWLGHLGPILKA 101  western clawe...
Feature 1                             # #                                                         
1KCW_A         81 ETGDKVYVHLKNLAsRPYTFHSHGITYYKEHEGAIYPDnttdfqraDDKVYPGEQYTYMLLATEEQSPGeGDGNCVTRIY 160  human
NP_571877     103 EEDDTVIVHLKNMArRAYSLHAHGLSYNKTNEGALYPDssekvekhDDSVAPGTTFTYIWTLPASHAPGkDDTNCLTRIY 182  zebrafish
Q9BQS7        106 EVGDVILIHLKNFAtRPYTIHPHGVFYEKDSEGSLYPDgssgplkaDDSVPPGGSHIYNWTIPEGHAPTdADPACLTWIY 185  human
NP_001098580  103 EVDDVMVVHMKNFAsRPYSLHPHGVFYKKDSEGALYPDgtsgrdkkDDAVAPGESYTYTWEVKPEYAPTeADASCLTWVY 182  zebrafish
Q6MZM0        107 EVGDVIVIHLKNFAsRPYSLHPHGVFYNKDSEGALYPDgtsgrnknDDMVPPGKNYTYVWPVREEYAPTpADANCLTWVY 186  human
XP_001235149  102 EVGDSIVIHLKNFAsRNYTLHPHGVKYTKENEGAFYPDntkgfekrDDAVKPGGQYTYTWDVTEDQGPAkGDADCITRVY 181  chicken
XP_002937375  102 EIGDIIIVHLKNFAsRPYSIHPHGVQYTKENEGALYPDnass-ghkDDAIEPGQSYTYRWEAVSEQGPTvQDEDCITRIY 180  western clawe...
Feature 1         # #                    
1KCW_A        161 HSHIDAPKDIASGLIGPLIICKK 183  human
NP_571877     183 HSHVNAPKDIASGLIGPLIVCKK 205  zebrafish
Q9BQS7        186 HSHVDAPRDIATGLIGPLITCKR 208  human
NP_001098580  183 HSHGDAPKDIASGLIGALLTCKK 205  zebrafish
Q6MZM0        187 HSHIDAPKDICSGLIGPLLVCKE 209  human
XP_001235149  182 HSHIDAPRDVASGLVGPLIICKK 204  chicken
XP_002937375  181 HSHIDGPKDVSSGLIGPLIICKK 203  western clawed frog

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