-
Sequence substring: one of the biological reads for a spot should contain the substring
Examples:
ATTGGA,
^ATTGGA,
ATTGGA$,
ATGDNNAT,
ATGGA&GCGC
String length limited to 29 characters in 4NA alphabet
(includes IUPAC substitution codes) or 61 characters in 2NA alphabet
(ACGT only). Search is case insensitive and strings may be combined
with boolean operators & | ! (AND, OR, NOT)
See "SRA nucleotide search expressions" for more details.
Maximum size of Run to be search is
1.1G
-
Name of a spot you are looking for.
Example: EXWA4RL02G9Z6H
-
Name of sample pool member, or "all" for all members.
Example: M12_V2
will return all spots assigned to the sample pool member M12_V2 for experiment SRX014738.
Please note that the filter searches across read boundaries within each spot.
Thus, pattern matches within technical reads and across paired-end data
boundaries will also be returned.
