Rhagoletis_zephyria_1.1

Organism name:: Rhagoletis zephyria (snowberry fruit fly)
Isolate:: East Lansing
BioSample:: SAMN04977950
BioProject:: PRJNA321204
Submitter:: University of Illinois at Urbana-Champaign
Date:: 2016/07/19
Release type:: minor
Assembly level:: Scaffold
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_001687245.2 (latest)
RefSeq assembly accession:: GCF_001687245.2 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: LYWK01
Assembly method:: SOAPdenovo v. JUL-2013; PBJelly2 v. FEB-2015; L_RNA_Scaffolder v. FEB-2016
Genome coverage:: 35.0x
Sequencing technology:: Illumina HiSeq

IDs: 12582661 [UID] 32893858 [GenBank] 32893878 [RefSeq]

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_001687245.2	=	GCF_001687245.2	Rhagoletis_zephyria_1.1	Scaffold	Latest GenBank, Latest RefSeq
GCA_001687245.1	=	GCF_001687245.1	Rhagoletis_zephyria_1.0	Scaffold	Replaced GenBank, Replaced RefSeq

In April 2022 4346 sequences were suppressed because they were found to be contaminants.

Total sequence length	1,109,796,908
Total ungapped length	1,041,293,135
Gaps between scaffolds	0
Number of scaffolds	84,794
Scaffold N50	63,039
Scaffold L50	3,449
Number of contigs	135,237
Contig N50	19,399
Contig L50	14,001
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	135,237