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Tcor1.0

  • Anomalous assembly.
Organism name:
Trachymyrmex cornetzi (ants)
Isolate:
Tcor2-1
BioSample:
SAMN03982882
BioProject:
PRJNA292627
Submitter:
BGI
Date:
2016/03/25
Assembly level:
Scaffold
Genome representation:
full
Assembly anomaly:
contaminated
Excluded from RefSeq:
  • contaminated
GenBank assembly accession:
GCA_001594075.1 (replaced)
RefSeq assembly accession:
GCF_001594075.1 (replaced)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LKEY01
Assembly method:
SOAPdenovo v. 2.04
Expected final version:
yes
Genome coverage:
109.0x
Sequencing technology:
Illumina HiSeq

IDs: 709221 [UID] 3135208 [GenBank] 3465298 [RefSeq]

See Genome Information for Trachymyrmex cornetzi

History (Show revision history)

Comment

In May 2022 168 sequences were suppressed because they were found to be contaminants.

Global statistics

Total sequence length369,438,293
Total ungapped length339,096,277
Gaps between scaffolds0
Number of scaffolds19,761
Scaffold N50760,749
Scaffold L50102
Number of contigs60,583
Contig N5029,356
Contig L502,708
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)60,583

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced369,438,29319,761339,096,277760,74940,8220