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icAntGran1.2 alternate haplotype

Organism name:
Anthonomus grandis grandis (boll weevil)
Sex:
male
BioSample:
SAMN21902058
BioProject:
PRJNA807391
Submitter:
United States Department of Agriculture
Date:
2022/07/29
Assembly type:
alternate-pseudohaplotype
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_022605985.2 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAKYJV02
Assembly method:
HiFiASM v. 0.14.2-r315
Expected final version:
yes
Genome coverage:
21x
Sequencing technology:
PacBio Sequel
Linked assembly:
GCA_022605725.3 (principal pseudohaplotype of diploid)

IDs: 13394441 [UID] 34948148 [GenBank]

See Genome Information for Anthonomus grandis

There are 4 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length371,797,639
Total ungapped length371,793,677
Gaps between scaffolds0
Number of scaffolds6,139
Scaffold N50120,554
Scaffold L50796
Number of contigs6,151
Contig N50120,506
Contig L50798
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)6,139

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced371,797,6396,139371,793,677120,554120