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ASM1759013v1

Organism name:
Pyrgilauda ruficollis (rufous-necked snowfinch)
Isolate:
IOZ18807
Sex:
pooled male and female
BioSample:
SAMN18252884
BioProject:
PRJNA417520
Submitter:
Institute of Zoology, Chinese Academy of Sciences
Date:
2021/03/26
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_017590135.1 (latest)
RefSeq assembly accession:
GCF_017590135.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
JAGGNJ01
Assembly method:
SOAPdenovo v. 2.04
Expected final version:
yes
Genome coverage:
110.0x
Sequencing technology:
Illumina HiSeq

IDs: 9654951 [UID] 25815378 [GenBank] 26605328 [RefSeq]

See Genome Information for Pyrgilauda ruficollis

History (Show revision history)

Comment

Global statistics

Total sequence length1,045,984,361
Total ungapped length1,043,875,986
Gaps between scaffolds0
Number of scaffolds24,055
Scaffold N509,601,729
Scaffold L5034
Number of contigs28,659
Contig N50660,259
Contig L50436
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)24,055

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,045,967,45224,0541,043,859,0779,601,7294,6040
MoleculeTotal
Length
Mitochondrion MT16,909