ID 743493 - BioProject

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Accession: PRJEB46046 ID: 743493

EMG produced TPA metagenomics assembly of PRJEB4419 data set (Shotgun Sequencing of Tara Oceans DNA samples corresponding to size fractions for small DNA viruses.).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB4419, and was assembled with metaSPAdes v3. More...

Accession	PRJEB46046
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 3-Jul-2021 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	6980
WGS master	219
Publications
PubMed	1
PMC	1
Other datasets
BioSample	219
Assembly	219

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

219
219

Assembly	WGS	BioSample	Taxonomy
GCA_963972435.1	CAXATN000000000	SAMEA115325448	Acinetobacter baylyi
GCA_963972245.1	CAXAWK000000000	SAMEA115325517	Allopontixanthobacter confluentis
GCA_963971925.1	CAXAWB000000000	SAMEA115325434	Alteromonas macleodii
GCA_963971655.1	CAXASR000000000	SAMEA115325417	Arenibacter palladensis
GCA_963973345.1	CAXAZB000000000	SAMEA115325485	Aurantimonas coralicida
GCA_963972805.1	CAXAYH000000000	SAMEA115325515	Bizionia echini
GCA_963971875.1	CAXASY000000000	SAMEA115325450	Celeribacter baekdonensis
GCA_963971765.1	CAXASS000000000	SAMEA115325497	Croceibacter atlanticus
GCA_963971965.1	CAXAST000000000	SAMEA115325321	Gimesia maris
GCA_963972755.1	CAXAWT000000000	SAMEA115325479	Idiomarina abyssalis
GCA_963972725.1	CAXAWZ000000000	SAMEA115325458	Leeuwenhoekiella blandensis
GCA_963973155.1	CAXAYT000000000	SAMEA115325326	Leisingera aquimarina
GCA_963972645.1	CAXAWR000000000	SAMEA115325483	Marinobacter nauticus
GCA_963972075.1	CAXATC000000000	SAMEA115325411	Porticoccus hydrocarbonoclasticus
GCA_963972415.1	CAXATG000000000	SAMEA115325425	Pseudohongiella acticola
GCA_963972145.1	CAXATY000000000	SAMEA115325429	Pseudohongiella nitratireducens
GCA_963972095.1	CAXAYA000000000	SAMEA115325510	Rhodococcus fascians
GCA_963972565.1	CAXAVG000000000	SAMEA115325426	Rhodopirellula europaea
GCA_963973415.1	CAXBAQ000000000	SAMEA115325469	Roseivirga seohaensis
GCA_963972895.1	CAXAXR000000000	SAMEA115325499	Roseovarius nubinhibens
GCA_963973785.1	CAXBAB000000000	SAMEA115325379	Stutzerimonas kunmingensis
GCA_963972455.1	CAXAUQ000000000	SAMEA115325419	Stutzerimonas stutzeri
GCA_963973095.1	CAXAXN000000000	SAMEA115325449	Sulfitobacter dubius
GCA_963973145.1	CAXCFC000000000	SAMEA115325328	Thalassospira lohafexi
GCA_963973235.1	CAXAYD000000000	SAMEA115325397	Thalassospira xiamenensis
GCA_963973445.1	CAXAZJ000000000	SAMEA115325341	Vreelandella sedimenti
GCA_963973655.1	CAXBAR000000000	SAMEA115325331	Zunongwangia profunda
GCA_963973395.1	CAXBAZ000000000	SAMEA115325359	uncultured Acidimicrobiaceae bacterium
GCA_963972525.1	CAXAUZ000000000	SAMEA115325316	uncultured Acidimicrobiaceae bacterium
GCA_963972325.1	CAXAWD000000000	SAMEA115325433	uncultured Acidimicrobiaceae bacterium
GCA_963973645.1	CAXBAP000000000	SAMEA115325495	uncultured Actibacterium sp.
GCA_963971595.1	CAXAVT000000000	SAMEA115325508	uncultured Actibacterium sp.
GCA_963971825.1	CAXASX000000000	SAMEA115325513	uncultured Aequorivita sp.
GCA_963972935.1	CAXAXL000000000	SAMEA115325530	uncultured Aequorivita sp.
GCA_963973605.1	CAXAZQ000000000	SAMEA115325373	uncultured Aequorivita sp.
GCA_963973185.1	CAXAYW000000000	SAMEA115325320	uncultured Alcaligenaceae bacterium
GCA_963973435.1	CAXAZG000000000	SAMEA115325344	uncultured Alcaligenaceae bacterium
GCA_963973425.1	CAXAZE000000000	SAMEA115325340	uncultured Alcaligenaceae bacterium
GCA_963973215.1	CAXAYN000000000	SAMEA115325378	uncultured Alcanivorax sp.
GCA_963972085.1	CAXAVB000000000	SAMEA115325506	uncultured Alcanivorax sp.
GCA_963971865.1	CAXATS000000000	SAMEA115325480	uncultured Alcanivorax sp.
GCA_963972705.1	CAXAWV000000000	SAMEA115325330	uncultured Algoriphagus sp.
GCA_963973465.1	CAXAZH000000000	SAMEA115325338	uncultured Alphaproteobacteria bacterium
GCA_963971675.1	CAXASQ000000000	SAMEA115325356	uncultured Alphaproteobacteria bacterium
GCA_963972185.1	CAXATI000000000	SAMEA115325402	uncultured Alphaproteobacteria bacterium
GCA_963972005.1	CAXAUA000000000	SAMEA115325403	uncultured Alphaproteobacteria bacterium
GCA_963972385.1	CAXAVU000000000	SAMEA115325423	uncultured Alphaproteobacteria bacterium
GCA_963972355.1	CAXAWE000000000	SAMEA115325422	uncultured Alphaproteobacteria bacterium
GCA_963972995.1	CAXAXI000000000	SAMEA115325454	uncultured Altibacter sp.
GCA_963973375.1	CAXAZV000000000	SAMEA115325396	uncultured Antarcticibacterium sp.
GCA_963972175.1	CAXAVP000000000	SAMEA115325372	uncultured Arenibacter sp.
GCA_963972165.1	CAXAVD000000000	SAMEA115325360	uncultured Arenibacter sp.
GCA_963973175.1	CAXAYM000000000	SAMEA115325505	uncultured Arenimonas sp.
GCA_963973695.1	CAXAZR000000000	SAMEA115325511	uncultured Balneola sp.
GCA_963973295.1	CAXAYI000000000	SAMEA115325459	uncultured Balneolaceae bacterium
GCA_963972595.1	CAXAVF000000000	SAMEA115325350	uncultured Balneolaceae bacterium
GCA_963973575.1	CAXAZS000000000	SAMEA115325325	uncultured Brevundimonas sp.
GCA_963971845.1	CAXAUL000000000	SAMEA115325477	uncultured Candidatus Saccharibacteria bacterium
GCA_963971855.1	CAXAUK000000000	SAMEA115325504	uncultured Candidatus Saccharibacteria bacterium
GCA_963973125.1	CAXAXU000000000	SAMEA115325474	uncultured Caulobacteraceae bacterium
GCA_963971905.1	CAXAVL000000000	SAMEA115325332	uncultured Cellvibrio sp.
GCA_963973015.1	CAXAXE000000000	SAMEA115325390	uncultured Chromatiaceae bacterium
GCA_963973625.1	CAXBAX000000000	SAMEA115325347	uncultured Citromicrobium sp.
GCA_963973325.1	CAXAZI000000000	SAMEA115325531	uncultured Citromicrobium sp.
GCA_963973585.1	CAXAZW000000000	SAMEA115325466	uncultured Cobetia sp.
GCA_963973685.1	CAXAZT000000000	SAMEA115325336	uncultured Erythrobacter sp.
GCA_963972905.1	CAXAXQ000000000	SAMEA115325345	uncultured Erythrobacteraceae bacterium
GCA_963973265.1	CAXAYG000000000	SAMEA115325377	uncultured Erythrobacteraceae bacterium
GCA_963972665.1	CAXAUP000000000	SAMEA115325362	uncultured Flavobacteriaceae bacterium
GCA_963973515.1	CAXAZM000000000	SAMEA115325413	uncultured Flavobacteriaceae bacterium
GCA_963972425.1	CAXAUF000000000	SAMEA115325354	uncultured Flavobacteriaceae bacterium
GCA_963973365.1	CAXAYY000000000	SAMEA115325335	uncultured Flavobacteriaceae bacterium
GCA_963972975.1	CAXAZL000000000	SAMEA115325333	uncultured Flavobacteriaceae bacterium
GCA_963972105.1	CAXAVH000000000	SAMEA115325460	uncultured Flavobacteriaceae bacterium
GCA_963971795.1	CAXAWA000000000	SAMEA115325431	uncultured Flavobacteriaceae bacterium
GCA_963971835.1	CAXASZ000000000	SAMEA115325519	uncultured Flavobacteriaceae bacterium
GCA_963972505.1	CAXAUG000000000	SAMEA115325516	uncultured Flavobacteriaceae bacterium
GCA_963973455.1	CAXAZF000000000	SAMEA115325500	uncultured Flavobacteriaceae bacterium
GCA_963972275.1	CAXATB000000000	SAMEA115325342	uncultured Flavobacteriales bacterium
GCA_963971935.1	CAXATF000000000	SAMEA115325428	uncultured Flavobacteriales bacterium
GCA_963972305.1	CAXATT000000000	SAMEA115325404	uncultured Flavobacteriales bacterium
GCA_963973635.1	CAXAZY000000000	SAMEA115325375	uncultured Gammaproteobacteria bacterium
GCA_963971755.1	CAXASV000000000	SAMEA115325349	uncultured Gammaproteobacteria bacterium
GCA_963972515.1	CAXAUH000000000	SAMEA115325357	uncultured Gammaproteobacteria bacterium
GCA_963971895.1	CAXASW000000000	SAMEA115325518	uncultured Gammaproteobacteria bacterium
GCA_963972215.1	CAXATE000000000	SAMEA115325351	uncultured Gillisia sp.
GCA_963972205.1	CAXAUC000000000	SAMEA115325401	uncultured Gilvimarinus sp.
GCA_963972345.1	CAXAVM000000000	SAMEA115325318	uncultured Gimesia sp.
GCA_963972135.1	CAXATU000000000	SAMEA115325399	uncultured Hahellaceae bacterium
GCA_963973825.1	CAXBAE000000000	SAMEA115325487	uncultured Haliea sp.
GCA_963972575.1	CAXAUW000000000	SAMEA115325430	uncultured Haliea sp.
GCA_963972925.1	CAXAXO000000000	SAMEA115325393	uncultured Halieaceae bacterium
GCA_963973275.1	CAXAYJ000000000	SAMEA115325383	uncultured Halieaceae bacterium
GCA_963973805.1	CAXBBA000000000	SAMEA115325382	uncultured Halieaceae bacterium
GCA_963972815.1	CAXAXS000000000	SAMEA115325387	uncultured Halobacteriovorax sp.
GCA_963971815.1	CAXAVV000000000	SAMEA115325355	uncultured Halomonas sp.
GCA_963973135.1	CAXCFD000000000	SAMEA115325348	uncultured Halomonas sp.
GCA_963972655.1	CAXAVA000000000	SAMEA115325432	uncultured Halomonas sp.
GCA_963972745.1	CAXAYV000000000	SAMEA115325455	uncultured Halomonas sp.
GCA_963973065.1	CAXAYR000000000	SAMEA115325463	uncultured Halomonas sp.
GCA_963972785.1	CAXAYB000000000	SAMEA115325441	uncultured Hirschia sp.
GCA_963972675.1	CAXAUN000000000	SAMEA115325438	uncultured Hyphomicrobiales bacterium
GCA_963971915.1	CAXATQ000000000	SAMEA115325498	uncultured Hyphomicrobiales bacterium
GCA_963971725.1	CAXATL000000000	SAMEA115325421	uncultured Hyphomicrobiales bacterium
GCA_963972195.1	CAXATH000000000	SAMEA115325424	uncultured Hyphomonadaceae bacterium
GCA_963972155.1	CAXATM000000000	SAMEA115325522	uncultured Hyphomonas sp.
GCA_963971715.1	CAXAVX000000000	SAMEA115325388	uncultured Hyphomonas sp.
GCA_963973165.1	CAXAXP000000000	SAMEA115325381	uncultured Idiomarina sp.
GCA_963972225.1	CAXATK000000000	SAMEA115325339	uncultured Idiomarina sp.
GCA_963973745.1	CAXBAM000000000	SAMEA115325389	uncultured Legionella sp.
GCA_963972295.1	CAXAWF000000000	SAMEA115325352	uncultured Loktanella sp.
GCA_963972255.1	CAXATO000000000	SAMEA115325323	uncultured Magnetovibrio sp.
GCA_963972375.1	CAXATW000000000	SAMEA115325439	uncultured Maribacter sp.
GCA_963971995.1	CAXATV000000000	SAMEA115325353	uncultured Marinimicrobium sp.
GCA_963971615.1	CAXAUU000000000	SAMEA115325400	uncultured Marinobacter sp.
GCA_963972955.1	CAXAXC000000000	SAMEA115325462	uncultured Marinobacter sp.
GCA_963972845.1	CAXAXD000000000	SAMEA115325464	uncultured Marinobacter sp.
GCA_963973775.1	CAXBAS000000000	SAMEA115325453	uncultured Marinobacter sp.
GCA_963971785.1	CAXATA000000000	SAMEA115325496	uncultured Marinobacter sp.
GCA_963972685.1	CAXAUY000000000	SAMEA115325514	uncultured Maritimibacter sp.
GCA_963973225.1	CAXAZC000000000	SAMEA115325452	uncultured Marivirga sp.
GCA_963972265.1	CAXAVN000000000	SAMEA115325501	uncultured Mesoflavibacter sp.
GCA_963971705.1	CAXAWC000000000	SAMEA115325410	uncultured Methyloligella sp.
GCA_963972285.1	CAXATJ000000000	SAMEA115325414	uncultured Methylophaga sp.
GCA_963972695.1	CAXAWP000000000	SAMEA115325525	uncultured Methylophaga sp.
GCA_963973715.1	CAXAZO000000000	SAMEA115325493	uncultured Methylophaga sp.
GCA_963973475.1	CAXBAL000000000	SAMEA115325491	uncultured Micavibrio sp.
GCA_963972045.1	CAXAWL000000000	SAMEA115325415	uncultured Microbacteriaceae bacterium
GCA_963972735.1	CAXAXB000000000	SAMEA115325408	uncultured Microbacteriaceae bacterium
GCA_963972625.1	CAXAWJ000000000	SAMEA115325314	uncultured Microbacteriaceae bacterium
GCA_963972615.1	CAXAWN000000000	SAMEA115325368	uncultured Microbacterium sp.
GCA_963971645.1	CAXAVE000000000	SAMEA115325444	uncultured Nioella sp.
GCA_963971685.1	CAXAWU000000000	SAMEA115325437	uncultured Nisaea sp.
GCA_963972825.1	CAXAZD000000000	SAMEA115325374	uncultured Nocardioides sp.
GCA_963972635.1	CAXAUI000000000	SAMEA115325456	uncultured Oceanicaulis sp.
GCA_963971625.1	CAXATD000000000	SAMEA115325327	uncultured Opitutia bacterium
GCA_963971885.1	CAXAWI000000000	SAMEA115325502	uncultured Panacagrimonas sp.
GCA_963973255.1	CAXAYE000000000	SAMEA115325529	uncultured Paraglaciecola sp.
GCA_963973555.1	CAXAZN000000000	SAMEA115325427	uncultured Parvibaculum sp.
GCA_963973305.1	CAXAYQ000000000	SAMEA115325363	uncultured Parvibaculum sp.
GCA_963972885.1	CAXAXY000000000	SAMEA115325470	uncultured Pelagibacterium sp.
GCA_963972945.1	CAXAYX000000000	SAMEA115325503	uncultured Phycisphaerales bacterium
GCA_963973245.1	CAXAYC000000000	SAMEA115325366	uncultured Phycisphaerales bacterium
GCA_963973795.1	CAXBAF000000000	SAMEA115325409	uncultured Phycisphaerales bacterium
GCA_963972125.1	CAXAUD000000000	SAMEA115325406	uncultured Phycisphaerales bacterium
GCA_963972485.1	CAXAWH000000000	SAMEA115325418	uncultured Planctomycetaceae bacterium
GCA_963973675.1	CAXBAN000000000	SAMEA115325334	uncultured Planktosalinus sp.
GCA_963973485.1	CAXBAC000000000	SAMEA115325481	uncultured Polaribacter sp.
GCA_963973285.1	CAXAYK000000000	SAMEA115325398	uncultured Polycyclovorans sp.
GCA_963973525.1	CAXBAA000000000	SAMEA115325492	uncultured Porticoccus sp.
GCA_963973545.1	CAXBBC000000000	SAMEA115325494	uncultured Pseudoalteromonas sp.
GCA_963972985.1	CAXAXH000000000	SAMEA115325461	uncultured Pseudoalteromonas sp.
GCA_963973815.1	CAXBAK000000000	SAMEA115325391	uncultured Pseudoalteromonas sp.
GCA_963973385.1	CAXBAY000000000	SAMEA115325367	uncultured Pseudoalteromonas sp.
GCA_963973315.1	CAXAYO000000000	SAMEA115325457	uncultured Pseudohongiella sp.
GCA_963973335.1	CAXAYZ000000000	SAMEA115325484	uncultured Pseudomonadaceae bacterium
GCA_963973005.1	CAXAWY000000000	SAMEA115325394	uncultured Pseudomonadaceae bacterium
GCA_963972545.1	CAXAUS000000000	SAMEA115325322	uncultured Pseudomonadaceae bacterium
GCA_963971635.1	CAXASU000000000	SAMEA115325315	uncultured Pseudomonadaceae bacterium
GCA_963973725.1	CAXAZZ000000000	SAMEA115325405	uncultured Pseudomonas sp.
GCA_963972335.1	CAXAVI000000000	SAMEA115325524	uncultured Pseudomonas sp.
GCA_963972855.1	CAXAZA000000000	SAMEA115325364	uncultured Pseudosulfitobacter sp.
GCA_963972315.1	CAXATP000000000	SAMEA115325317	uncultured Psychrobacter sp.
GCA_963973045.1	CAXAYP000000000	SAMEA115325475	uncultured Psychrobacter sp.
GCA_963973665.1	CAXBAO000000000	SAMEA115325488	uncultured Rhodobiaceae bacterium
GCA_963972765.1	CAXAXF000000000	SAMEA115325476	uncultured Rhodobiaceae bacterium
GCA_963972065.1	CAXAVJ000000000	SAMEA115325442	uncultured Rhodospirillaceae bacterium
GCA_963973025.1	CAXAYU000000000	SAMEA115325489	uncultured Rhodospirillaceae bacterium
GCA_963972875.1	CAXAWX000000000	SAMEA115325486	uncultured Rhodospirillaceae bacterium
GCA_963973035.1	CAXAXX000000000	SAMEA115325527	uncultured Rhodospirillaceae bacterium
GCA_963971735.1	CAXAWQ000000000	SAMEA115325420	uncultured Rhodospirillales bacterium
GCA_963973495.1	CAXBAU000000000	SAMEA115325384	uncultured Rhodothermaceae bacterium
GCA_963973615.1	CAXBBB000000000	SAMEA115325482	uncultured Rhodothermales bacterium
GCA_963971665.1	CAXAUO000000000	SAMEA115325313	uncultured Roseivirga sp.
GCA_963973105.1	CAXAXZ000000000	SAMEA115325528	uncultured Roseobacter sp.
GCA_963973535.1	CAXAZK000000000	SAMEA115325478	uncultured Roseobacteraceae bacterium
GCA_963973055.1	CAXAXT000000000	SAMEA115325472	uncultured Roseobacteraceae bacterium
GCA_963972475.1	CAXAUR000000000	SAMEA115325451	uncultured Roseovarius sp.
GCA_963972555.1	CAXAUM000000000	SAMEA115325520	uncultured Roseovarius sp.
GCA_963972775.1	CAXAXW000000000	SAMEA115325365	uncultured Rubinisphaera sp.
GCA_963973195.1	CAXAZX000000000	SAMEA115325369	uncultured Salegentibacter sp.
GCA_963972535.1	CAXAVR000000000	SAMEA115325521	uncultured Salegentibacter sp.
GCA_963972465.1	CAXAVW000000000	SAMEA115325507	uncultured Salinibacterium sp.
GCA_963973595.1	CAXBBD000000000	SAMEA115325346	uncultured Sandaracinaceae bacterium
GCA_963971945.1	CAXAWG000000000	SAMEA115325509	uncultured Shewanella sp.
GCA_963973085.1	CAXAXA000000000	SAMEA115325490	uncultured Sneathiella sp.
GCA_963971775.1	CAXAVZ000000000	SAMEA115325440	uncultured Sneathiella sp.
GCA_963972055.1	CAXAVO000000000	SAMEA115325446	uncultured Sphingobium sp.
GCA_963971975.1	CAXAVS000000000	SAMEA115325319	uncultured Sphingobium sp.
GCA_963972965.1	CAXAXM000000000	SAMEA115325471	uncultured Sphingomonadales bacterium
GCA_963973835.1	CAXBAG000000000	SAMEA115325358	uncultured Spongiibacteraceae bacterium
GCA_963972835.1	CAXAWW000000000	SAMEA115325526	uncultured Stutzerimonas sp.
GCA_963973355.1	CAXAZU000000000	SAMEA115325468	uncultured Sulfitobacter sp.
GCA_963972715.1	CAXAXG000000000	SAMEA115325465	uncultured Sulfitobacter sp.
GCA_963972495.1	CAXAUJ000000000	SAMEA115325337	uncultured Sulfitobacter sp.
GCA_963973505.1	CAXBAT000000000	SAMEA115325329	uncultured Thalassospira sp.
GCA_963972015.1	CAXATX000000000	SAMEA115325370	uncultured Thalassospira sp.
GCA_963971805.1	CAXAVY000000000	SAMEA115325376	uncultured Thalassospira sp.
GCA_963972035.1	CAXAWS000000000	SAMEA115325436	uncultured Thalassospira sp.
GCA_963972605.1	CAXAUT000000000	SAMEA115325523	uncultured Thalassospira sp.
GCA_963972405.1	CAXAWO000000000	SAMEA115325343	uncultured Thalassospiraceae bacterium
GCA_963972795.1	CAXAYL000000000	SAMEA115325385	uncultured Ulvibacter sp.
GCA_963972445.1	CAXATR000000000	SAMEA115325443	uncultured Winogradskyella sp.
GCA_963971605.1	CAXATZ000000000	SAMEA115325445	uncultured Xanthomarina sp.
GCA_963971985.1	CAXAVQ000000000	SAMEA115325435	uncultured bacterium
GCA_963971695.1	CAXAVC000000000	SAMEA115325416	uncultured bacterium
GCA_963973205.1	CAXAYF000000000	SAMEA115325467	uncultured bacterium
GCA_963972115.1	CAXAVK000000000	SAMEA115325447	uncultured bacterium
GCA_963973755.1	CAXBAD000000000	SAMEA115325512	uncultured bacterium
GCA_963973115.1	CAXAXV000000000	SAMEA115325473	uncultured bacterium
GCA_963973405.1	CAXAZP000000000	SAMEA115325386	uncultured bacterium
GCA_963973735.1	CAXBAV000000000	SAMEA115325380	uncultured bacterium
GCA_963973565.1	CAXBAJ000000000	SAMEA115325371	uncultured bacterium
GCA_963972585.1	CAXAUV000000000	SAMEA115325361	uncultured bacterium
GCA_963971955.1	CAXAUE000000000	SAMEA115325407	uncultured bacterium
GCA_963972025.1	CAXAUB000000000	SAMEA115325412	uncultured bacterium
GCA_963973705.1	CAXBAI000000000	SAMEA115325392	uncultured bacterium
GCA_963973765.1	CAXBAH000000000	SAMEA115325395	uncultured bacterium
GCA_963972395.1	CAXAWM000000000	SAMEA115325324	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJEB4419 data set (Shotgun Sequencing of Tara Oceans DNA samples corresponding to size fractions for small DNA viruses.).

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