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Accession: PRJEB53025 ID: 841926

EMG produced TPA metagenomics assembly of PRJNA793167 data set (Healthy and diarrhea piglets feces microbiota analysis).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA793167, and was assembled with metaSPAdes v3. More...
AccessionPRJEB53025
Data TypeGenome sequencing and assembly
ScopeMonoisolate
KeywordTPA:assembly
PublicationsMitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
SubmissionRegistration date: 24-May-2022
EMG
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)4178
WGS master366
Publications
PubMed1
PMC1
Other datasets
BioSample366
Assembly366
Assembly details:
Assembly levelNumber of Assemblies
366
366
AssemblyLevelWGSBioSampleTaxonomy
GCA_945874425.1ContigCAMCGM000000000SAMEA110402967
GCA_945876735.1ContigCAMCPJ000000000SAMEA110402961
GCA_945876425.1ContigCAMCNW000000000SAMEA110403172
GCA_945877025.1ContigCAMCQF000000000SAMEA110403113
GCA_945871215.1ContigCAMBUT000000000SAMEA110403288
GCA_945872485.1ContigCAMBYZ000000000SAMEA110402956
GCA_945867685.1ContigCAMBIS000000000SAMEA110403286
GCA_945873215.1ContigCAMCCJ000000000SAMEA110403010
GCA_945876835.1ContigCAMCPQ000000000SAMEA110402958
GCA_945872295.1ContigCAMBYO000000000SAMEA110402981
GCA_945871525.1ContigCAMBVW000000000SAMEA110403039
GCA_945873345.1ContigCAMCCY000000000SAMEA110402955
GCA_945873375.1ContigCAMCCI000000000SAMEA110402998
GCA_945867945.1ContigCAMBJO000000000SAMEA110403007
GCA_945878675.1ContigCAMCUF000000000SAMEA110403013
GCA_945873825.1ContigCAMCEH000000000SAMEA110403152
GCA_945868775.1ContigCAMBMP000000000SAMEA110403211
GCA_945869635.1ContigCAMBPI000000000SAMEA110403253
GCA_945878395.1ContigCAMDXV000000000SAMEA110403305
GCA_945867715.1ContigCAMBIV000000000SAMEA110403178
GCA_945872475.1ContigCAMBZH000000000SAMEA110403027
GCA_945867735.1ContigCAMBIW000000000SAMEA110403054
GCA_945873965.1ContigCAMCEU000000000SAMEA110403184
GCA_945865715.1ContigCAMBEM000000000SAMEA110402979
GCA_945869535.1ContigCAMBPF000000000SAMEA110403314
GCA_945875405.1ContigCAMCKM000000000SAMEA110402968
GCA_945870365.1ContigCAMBRT000000000SAMEA110403029
GCA_945873735.1ContigCAMCDZ000000000SAMEA110403028
GCA_945875655.1ContigCAMCLB000000000SAMEA110403137
GCA_945876615.1ContigCAMCOW000000000SAMEA110403231
GCA_945871535.1ContigCAMBVY000000000SAMEA110403035
GCA_945873635.1ContigCAMCDR000000000SAMEA110403170
GCA_945877485.1ContigCAMDXL000000000SAMEA110403251
GCA_945877495.1ContigCAMDWP000000000SAMEA110403258
GCA_945873865.1ContigCAMCEO000000000SAMEA110403077
GCA_945873815.1ContigCAMCEE000000000SAMEA110403176
GCA_945872385.1ContigCAMBZA000000000SAMEA110403182
GCA_945865225.1ContigCAMBDG000000000SAMEA110403016
GCA_945877305.1ContigCAMCRG000000000SAMEA110403026
GCA_945875445.1ContigCAMCKJ000000000SAMEA110403034
GCA_945875215.1ContigCAMCJL000000000SAMEA110403076
GCA_945865335.1ContigCAMBDH000000000SAMEA110403149
GCA_945865235.1ContigCAMBDJ000000000SAMEA110403049
GCA_945869285.1ContigCAMBOL000000000SAMEA110402985
GCA_945869275.1ContigCAMBOJ000000000SAMEA110403208
GCA_945863895.1ContigCAMBAC000000000SAMEA110403090
GCA_945869555.1ContigCAMBPH000000000SAMEA110403303
GCA_945868355.1ContigCAMBLE000000000SAMEA110403127
GCA_945876995.1ContigCAMCQN000000000SAMEA110403063
GCA_945864095.1ContigCAMBAG000000000SAMEA110403141
GCA_945877455.1ContigCAMDVF000000000SAMEA110403241
GCA_945865585.1ContigCAMBEA000000000SAMEA110402963
GCA_945879025.1ContigCAMDVV000000000SAMEA110403297
GCA_945871245.1ContigCAMBVN000000000SAMEA110403307
GCA_945865265.1ContigCAMBDD000000000SAMEA110403064
GCA_945867825.1ContigCAMBJC000000000SAMEA110403031
GCA_945876235.1ContigCAMCNK000000000SAMEA110403057
GCA_945874335.1ContigCAMCGG000000000SAMEA110403001
GCA_945876145.1ContigCAMCMR000000000SAMEA110403072
GCA_945867475.1ContigCAMBIE000000000SAMEA110403030
GCA_945875185.1ContigCAMCJH000000000SAMEA110403125
GCA_945869515.1ContigCAMBOT000000000SAMEA110403306
GCA_945874155.1ContigCAMCFO000000000SAMEA110402953
GCA_945874475.1ContigCAMCGR000000000SAMEA110403295
GCA_945875245.1ContigCAMCJR000000000SAMEA110403268
GCA_945868745.1ContigCAMBMK000000000SAMEA110403220
GCA_945869315.1ContigCAMBOM000000000SAMEA110403075
GCA_945875415.1ContigCAMCKS000000000SAMEA110403004
GCA_945874815.1ContigCAMCIE000000000SAMEA110403269
GCA_945873405.1ContigCAMCDB000000000SAMEA110403014
GCA_945871865.1ContigCAMBXK000000000SAMEA110402977
GCA_945877325.1ContigCAMCRL000000000SAMEA110403115
GCA_945870515.1ContigCAMBSJ000000000SAMEA110403289
GCA_945870315.1ContigCAMBRR000000000SAMEA110403233
GCA_945870385.1ContigCAMBRX000000000SAMEA110403159
GCA_945875615.1ContigCAMCLF000000000SAMEA110403151
GCA_945876775.1ContigCAMCPN000000000SAMEA110402986
GCA_945870535.1ContigCAMBSG000000000SAMEA110403287
GCA_945870285.1ContigCAMBRO000000000SAMEA110403278
GCA_945875835.1ContigCAMCLX000000000SAMEA110403284
GCA_945869235.1ContigCAMBOF000000000SAMEA110402987
GCA_945868315.1ContigCAMBKW000000000SAMEA110403201
GCA_945874355.1ContigCAMCGB000000000SAMEA110403033
GCA_945865495.1ContigCAMBEF000000000SAMEA110403311
GCA_945878425.1ContigCAMCTB000000000SAMEA110403310
GCA_945870775.1ContigCAMBTI000000000SAMEA110403308
GCA_945879055.1ContigCAMDVW000000000SAMEA110402969
GCA_945872375.1ContigCAMBYR000000000SAMEA110403145
GCA_945876605.1ContigCAMCOY000000000SAMEA110403216
GCA_945865785.1ContigCAMBEU000000000SAMEA110402999
GCA_945863155.1ContigCAMAZA000000000SAMEA110403123
GCA_945871675.1ContigCAMBWP000000000SAMEA110403242
GCA_945873855.1ContigCAMCEN000000000SAMEA110402990
GCA_945875205.1ContigCAMCJJ000000000SAMEA110403279
GCA_945868765.1ContigCAMBMJ000000000SAMEA110403161
GCA_945868935.1ContigCAMBNE000000000SAMEA110403228
GCA_945877475.1ContigCAMDUC000000000SAMEA110403255
GCA_945873295.1ContigCAMCCS000000000SAMEA110403281
GCA_945869595.1ContigCAMBPE000000000SAMEA110403257
GCA_945870215.1ContigCAMBQW000000000SAMEA110403285
GCA_945879165.1ContigCAMCUW000000000SAMEA110403301
GCA_945877375.1ContigCAMCRW000000000SAMEA110403238
GCA_945876745.1ContigCAMCPL000000000SAMEA110403009
GCA_945874555.1ContigCAMCHE000000000SAMEA110403153
GCA_945877015.1ContigCAMCQI000000000SAMEA110403068
GCA_945868455.1ContigCAMBLK000000000SAMEA110403171
GCA_945878965.1ContigCAMCUJ000000000SAMEA110402992
GCA_945864175.1ContigCAMBAK000000000SAMEA110403081
GCA_945874385.1ContigCAMCGL000000000SAMEA110403104
GCA_945872165.1ContigCAMBYS000000000SAMEA110403140
GCA_945875665.1ContigCAMCLG000000000SAMEA110403138
GCA_945871475.1ContigCAMBVT000000000SAMEA110402970
GCA_945871105.1ContigCAMBUO000000000SAMEA110403053
GCA_945876485.1ContigCAMCOO000000000SAMEA110403167
GCA_945874875.1ContigCAMCHU000000000SAMEA110403187
GCA_945876285.1ContigCAMCNO000000000SAMEA110402997
GCA_945876165.1ContigCAMCNA000000000SAMEA110403102
GCA_945873955.1ContigCAMCFA000000000SAMEA110403111
GCA_945868025.1ContigCAMBKP000000000SAMEA110403094
GCA_945874775.1ContigCAMCHW000000000SAMEA110403207
GCA_945873875.1ContigCAMCER000000000SAMEA110403106
GCA_945871185.1ContigCAMBUW000000000SAMEA110402973
GCA_945868075.1ContigCAMBJS000000000SAMEA110402957
GCA_945876455.1ContigCAMCOE000000000SAMEA110403199
GCA_945876635.1ContigCAMCOZ000000000SAMEA110403210
GCA_945870395.1ContigCAMBSF000000000SAMEA110403214
GCA_945876755.1ContigCAMCPM000000000SAMEA110402974
GCA_945868395.1ContigCAMBLD000000000SAMEA110403006
GCA_945873695.1ContigCAMCDX000000000SAMEA110403041
GCA_945867255.1ContigCAMBHV000000000SAMEA110403263
GCA_945870245.1ContigCAMBRB000000000SAMEA110403302
GCA_945875525.1ContigCAMCKV000000000SAMEA110403136
GCA_945872455.1ContigCAMBYW000000000SAMEA110403189
GCA_945875515.1ContigCAMCKU000000000SAMEA110403011
GCA_945875625.1ContigCAMCKX000000000SAMEA110403091
GCA_945874885.1ContigCAMCID000000000SAMEA110403252
GCA_945864025.1ContigCAMBAI000000000SAMEA110403100
GCA_945872515.1ContigCAMBZL000000000SAMEA110403070
GCA_945865445.1ContigCAMBDX000000000SAMEA110403105
GCA_945876195.1ContigCAMCMV000000000SAMEA110402980
GCA_945865995.1ContigCAMBFL000000000SAMEA110403155
GCA_945864305.1ContigCAMBAJ000000000SAMEA110403069
GCA_945872615.1ContigCAMBZZ000000000SAMEA110403192
GCA_945876845.1ContigCAMCPU000000000SAMEA110403250
GCA_945874245.1ContigCAMCFS000000000SAMEA110403024
GCA_945877285.1ContigCAMCRS000000000SAMEA110403092
GCA_945873595.1ContigCAMCDU000000000SAMEA110402988
GCA_945869905.1ContigCAMBQD000000000SAMEA110403229
GCA_945879045.1ContigCAMCUS000000000SAMEA110403061
GCA_945864625.1ContigCAMBBJ000000000SAMEA110403071
GCA_945865435.1ContigCAMBEB000000000SAMEA110403317
GCA_945873765.1ContigCAMCED000000000SAMEA110403095
GCA_945877365.1ContigCAMCRV000000000SAMEA110403235
GCA_945865215.1ContigCAMBDF000000000SAMEA110403040
GCA_945870135.1ContigCAMBRE000000000SAMEA110403277
GCA_945863535.1ContigCAMAZJ000000000SAMEA110403012
GCA_945867525.1ContigCAMBII000000000SAMEA110403059
GCA_945877525.1ContigCAMDVP000000000SAMEA110403205
GCA_945879175.1ContigCAMDXU000000000SAMEA110403313
GCA_945878665.1ContigCAMDUN000000000SAMEA110402964
GCA_945871595.1ContigCAMBWC000000000SAMEA110403132
GCA_945876125.1ContigCAMCMX000000000SAMEA110403291
GCA_945865455.1ContigCAMBEG000000000SAMEA110403168
GCA_945875175.1ContigCAMCJE000000000SAMEA110403126
GCA_945874165.1ContigCAMCFR000000000SAMEA110402984
GCA_945868045.1ContigCAMBKI000000000SAMEA110403146
GCA_945869615.1ContigCAMBPG000000000SAMEA110403280
GCA_945864125.1ContigCAMBAZ000000000SAMEA110403078
GCA_945870095.1ContigCAMBQZ000000000SAMEA110403294
GCA_945876435.1ContigCAMCOD000000000SAMEA110403226
GCA_945870635.1ContigCAMBST000000000SAMEA110403180
GCA_945868425.1ContigCAMBLJ000000000SAMEA110403195
GCA_945867445.1ContigCAMBID000000000SAMEA110403191
GCA_945871545.1ContigCAMBWJ000000000SAMEA110403147
GCA_945867955.1ContigCAMBJP000000000SAMEA110403018
GCA_945876715.1ContigCAMCPH000000000SAMEA110402960
GCA_945863885.1ContigCAMAZY000000000SAMEA110403209
GCA_945875485.1ContigCAMCKO000000000SAMEA110403021
GCA_945865465.1ContigCAMBDV000000000SAMEA110403298
GCA_945871355.1ContigCAMBVI000000000SAMEA110403067
GCA_945875455.1ContigCAMCKN000000000SAMEA110403005
GCA_945874325.1ContigCAMCGC000000000SAMEA110403150
GCA_945877645.1ContigCAMDWX000000000SAMEA110403275
GCA_945877465.1ContigCAMDWY000000000SAMEA110403265
GCA_945865665.1ContigCAMBEE000000000SAMEA110402959
GCA_945872505.1ContigCAMBZD000000000SAMEA110403186
GCA_945869895.1ContigCAMBQA000000000SAMEA110403223
GCA_945876215.1ContigCAMCNH000000000SAMEA110403015
GCA_945875005.1ContigCAMCIQ000000000SAMEA110403273
GCA_945871095.1ContigCAMBUN000000000SAMEA110403058
GCA_945876725.1ContigCAMCPI000000000SAMEA110402994
GCA_945871965.1ContigCAMBXQ000000000SAMEA110402976
GCA_945873385.1ContigCAMCCO000000000SAMEA110403282
GCA_945874215.1ContigCAMCFP000000000SAMEA110402965
GCA_945871565.1ContigCAMBVU000000000SAMEA110403173
GCA_945873265.1ContigCAMCCK000000000SAMEA110403259
GCA_945872445.1ContigCAMBYX000000000SAMEA110403181
GCA_945870325.1ContigCAMBRQ000000000SAMEA110403073
GCA_945876855.1ContigCAMCQC000000000SAMEA110403062
GCA_945868445.1ContigCAMBLH000000000SAMEA110403200
GCA_945879155.1ContigCAMDVE000000000SAMEA110403237
GCA_945877405.1ContigCAMCSA000000000SAMEA110403246
GCA_945865205.1ContigCAMBDC000000000SAMEA110403107
GCA_945874905.1ContigCAMCIB000000000SAMEA110403185
GCA_945873355.1ContigCAMCCQ000000000SAMEA110403256
GCA_945875995.1ContigCAMCMC000000000SAMEA110402978
GCA_945878465.1ContigCAMDVL000000000SAMEA110402966
GCA_945871405.1ContigCAMBVO000000000SAMEA110403222
GCA_945869215.1ContigCAMBOE000000000SAMEA110403128
GCA_945871375.1ContigCAMBVJ000000000SAMEA110403169
GCA_945870445.1ContigCAMBSC000000000SAMEA110403300
GCA_945863045.1ContigCAMAZE000000000SAMEA110403315
GCA_945865285.1ContigCAMBDM000000000SAMEA110403088
GCA_945878415.1ContigCAMCTM000000000SAMEA110403292
GCA_945864645.1ContigCAMBBE000000000SAMEA110403044
GCA_945866525.1ContigCAMBHG000000000SAMEA110403245
GCA_945877435.1ContigCAMCSC000000000SAMEA110403249
GCA_945876265.1ContigCAMCND000000000SAMEA110403074
GCA_945877275.1ContigCAMCRR000000000SAMEA110403087
GCA_945871605.1ContigCAMBWK000000000SAMEA110403177
GCA_945867665.1ContigCAMBIR000000000SAMEA110403194
GCA_945864005.1ContigCAMBAF000000000SAMEA110403119
GCA_945877385.1ContigCAMCRX000000000SAMEA110403247
GCA_945875725.1ContigCAMCLO000000000SAMEA110403156
GCA_945871575.1ContigCAMBWA000000000SAMEA110403134
GCA_945872345.1ContigCAMBYY000000000SAMEA110403154
GCA_945873835.1ContigCAMCEI000000000SAMEA110402991
GCA_945868305.1ContigCAMBKU000000000SAMEA110403163
GCA_945872575.1ContigCAMBZQ000000000SAMEA110402971
GCA_945876065.1ContigCAMCML000000000SAMEA110403227
GCA_945864145.1ContigCAMBAN000000000SAMEA110403045
GCA_945874345.1ContigCAMCGD000000000SAMEA110403002
GCA_945871235.1ContigCAMBVB000000000SAMEA110403148
GCA_945875375.1ContigCAMCKG000000000SAMEA110403089
GCA_945878335.1ContigCAMCTF000000000SAMEA110403267
GCA_945864475.1ContigCAMBBF000000000SAMEA110403122
GCA_945876475.1ContigCAMCOG000000000SAMEA110403215
GCA_945877145.1ContigCAMCQZ000000000SAMEA110403213
GCA_945879135.1ContigCAMCUV000000000SAMEA110403318
GCA_945871645.1ContigCAMBWT000000000SAMEA110403183
GCA_945869225.1ContigCAMBOG000000000SAMEA110403060
GCA_945867975.1ContigCAMBKK000000000SAMEA110403101
GCA_945868435.1ContigCAMBLG000000000SAMEA110403174
GCA_945871395.1ContigCAMBVP000000000SAMEA110403003
GCA_945874185.1ContigCAMCFQ000000000SAMEA110403000
GCA_945871275.1ContigCAMBVE000000000SAMEA110403135
GCA_945874495.1ContigCAMCGU000000000SAMEA110402989
GCA_945879005.1ContigCAMDUU000000000SAMEA110402995
GCA_945879145.1ContigCAMCUZ000000000SAMEA110403230
GCA_945872535.1ContigCAMBZG000000000SAMEA110403143
GCA_945869295.1ContigCAMBOK000000000SAMEA110402954
GCA_945874975.1ContigCAMCIL000000000SAMEA110403272
GCA_945871205.1ContigCAMBUY000000000SAMEA110403112
GCA_945871495.1ContigCAMBVQ000000000SAMEA110403032
GCA_945863975.1ContigCAMBAX000000000SAMEA110403055
GCA_945864055.1ContigCAMBAE000000000SAMEA110402996
GCA_945871225.1ContigCAMBUX000000000SAMEA110403083
GCA_945878985.1ContigCAMDUK000000000SAMEA110403042
GCA_945871295.1ContigCAMBVF000000000SAMEA110403120
GCA_945876225.1ContigCAMCNG000000000SAMEA110402975
GCA_945863285.1ContigCAMAZD000000000SAMEA110403043
GCA_945876585.1ContigCAMCOU000000000SAMEA110403219
GCA_945868405.1ContigCAMBLF000000000SAMEA110403283
GCA_945872685.1ContigCAMCAD000000000SAMEA110403196
GCA_945874865.1ContigCAMCHZ000000000SAMEA110403221
GCA_945872435.1ContigCAMBYP000000000SAMEA110403131
GCA_945868335.1ContigCAMBKQ000000000SAMEA110403276
GCA_945872415.1ContigCAMBYQ000000000SAMEA110403065
GCA_945876795.1ContigCAMCPO000000000SAMEA110403240
GCA_945875055.1ContigCAMCIR000000000SAMEA110403262
GCA_945871315.1ContigCAMBVC000000000SAMEA110403118
GCA_945875805.1ContigCAMCLY000000000SAMEA110403139
GCA_945866445.1ContigCAMBHF000000000SAMEA110403254
GCA_945870235.1ContigCAMBRD000000000SAMEA110403304
GCA_945868085.1ContigCAMBKF000000000SAMEA110403206
GCA_945868915.1ContigCAMBNA000000000SAMEA110403160
GCA_945877165.1ContigCAMCRB000000000SAMEA110403290
GCA_945873935.1ContigCAMCET000000000SAMEA110403162
GCA_945876665.1ContigCAMCPC000000000SAMEA110403218
GCA_945876025.1ContigCAMCMQ000000000SAMEA110403020
GCA_945868145.1ContigCAMBKR000000000SAMEA110403165
GCA_945873625.1ContigCAMCDS000000000SAMEA110402993
GCA_945876045.1ContigCAMCMO000000000SAMEA110403266
GCA_945876535.1ContigCAMCOP000000000SAMEA110403084
GCA_945865245.1ContigCAMBDI000000000SAMEA110403110
GCA_945872465.1ContigCAMBYT000000000SAMEA110403025
GCA_945876765.1ContigCAMCPP000000000SAMEA110402983
GCA_945874935.1ContigCAMCIF000000000SAMEA110403264
GCA_945875465.1ContigCAMCKP000000000SAMEA110403103
GCA_945871515.1ContigCAMBWD000000000SAMEA110403224
GCA_945875635.1ContigCAMCLD000000000SAMEA110403142
GCA_945868385.1ContigCAMBLI000000000SAMEA110403197
GCA_945869265.1ContigCAMBOI000000000SAMEA110403239
GCA_945873745.1ContigCAMCEB000000000SAMEA110403017
GCA_945863955.1ContigCAMBBP000000000SAMEA110403019
GCA_945864605.1ContigCAMBAY000000000SAMEA110403114
GCA_945870795.1ContigCAMBTC000000000SAMEA110403316
GCA_945865515.1ContigCAMBED000000000SAMEA110403312
GCA_945877555.1ContigCAMDXC000000000SAMEA110403179
GCA_945874985.1ContigCAMCIM000000000SAMEA110403260
GCA_945875575.1ContigCAMCLA000000000SAMEA110403217
GCA_945871585.1ContigCAMBVV000000000SAMEA110403080
GCA_945877415.1ContigCAMCSB000000000SAMEA110403243
GCA_945877335.1ContigCAMCRH000000000SAMEA110403050
GCA_945865915.1ContigCAMBFH000000000SAMEA110403166
GCA_945871365.1ContigCAMBVM000000000SAMEA110403098
GCA_945865175.1ContigCAMBDA000000000SAMEA110402982
GCA_945870065.1ContigCAMBQU000000000SAMEA110403299
GCA_945865475.1ContigCAMBDZ000000000SAMEA110403037
GCA_945875275.1ContigCAMCJQ000000000SAMEA110403293
GCA_945871305.1ContigCAMBVH000000000SAMEA110403117
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