nsv6623256

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:41
Validation:Not tested
Clinical Assertions: No
Region Size:49,251

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 712 SVs from 78 studies. See in: genome view

Remapped(Score: Perfect):43,598,211-43,647,461

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6623256	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nsv6623256	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	43,890,409	43,939,659

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18282110	deletion	OSC2163	SNP array	Probe signal intensity	12
nssv18282617	deletion	OSC2077	SNP array	Probe signal intensity	9
nssv18283584	deletion	OSC2324	SNP array	Probe signal intensity	10
nssv18284141	duplication	OSC0262	SNP array	Probe signal intensity	7
nssv18284970	deletion	OSC2662	SNP array	Probe signal intensity	nssv18284362, nssv18284971, nssv18284363
nssv18285149	deletion	OSC2560	SNP array	Probe signal intensity	6
nssv18285384	deletion	OSC2722	SNP array	Probe signal intensity	8
nssv18288291	deletion	OSC3296	SNP array	Probe signal intensity	7
nssv18288738	duplication	OSC3161	SNP array	Probe signal intensity	9
nssv18289646	deletion	OSC3369	SNP array	Probe signal intensity	5
nssv18290651	deletion	OSC3656	SNP array	Probe signal intensity	9
nssv18291155	deletion	OSC3776	SNP array	Probe signal intensity	6
nssv18291447	deletion	OSC3766	SNP array	Probe signal intensity	6
nssv18292327	duplication	OSC3956	SNP array	Probe signal intensity	8
nssv18292730	deletion	OSC3997	SNP array	Probe signal intensity	nssv18292390, nssv18292391, nssv18292729
nssv18293693	duplication	OSC4043	SNP array	Probe signal intensity	8
nssv18294118	deletion	OSC4327	SNP array	Probe signal intensity	8
nssv18294203	deletion	OSC4394	SNP array	Probe signal intensity	nssv18294204, nssv18295098, nssv18295099
nssv18294683	deletion	OSC4322	SNP array	Probe signal intensity	nssv18294351, nssv18294352, nssv18294353
nssv18295114	duplication	OSC4405	SNP array	Probe signal intensity	11
nssv18295700	deletion	OSC4640	SNP array	Probe signal intensity	nssv18295468, nssv18296018
nssv18296071	deletion	OSC4683	SNP array	Probe signal intensity	nssv18295751, nssv18295752, nssv18295753
nssv18296896	deletion	OSC4838	SNP array	Probe signal intensity	6
nssv18297548	deletion	OSC4834	SNP array	Probe signal intensity	nssv18296656, nssv18296657, nssv18297549
nssv18297635	deletion	OSC4903	SNP array	Probe signal intensity	6
nssv18298631	duplication	OSC4956	SNP array	Probe signal intensity	5
nssv18298794	deletion	OSC5066	SNP array	Probe signal intensity	6
nssv18299505	deletion	OSC5158	SNP array	Probe signal intensity	nssv18298937, nssv18298938, nssv18299507
nssv18299624	deletion	OSC0053	SNP array	Probe signal intensity	5
nssv18299887	deletion	OSC5205	SNP array	Probe signal intensity	7
nssv18300266	duplication	OSC5478	SNP array	Probe signal intensity	nssv18300267, nssv18301147, nssv18300860
nssv18301982	duplication	OSC0582	SNP array	Probe signal intensity	14
nssv18321518	deletion	OSC1193	SNP array	Probe signal intensity	6
nssv18321590	deletion	OSC0001	SNP array	Probe signal intensity	11
nssv18322548	deletion	OSC1529	SNP array	Probe signal intensity	8
nssv18322567	deletion	OSC1543	SNP array	Probe signal intensity	6
nssv18322662	deletion	OSC1340	SNP array	Probe signal intensity	8
nssv18323410	deletion	OSC1480	SNP array	Probe signal intensity	nssv18322857, nssv18323408, nssv18323409
nssv18323520	deletion	OSC1563	SNP array	Probe signal intensity	nssv18323521
nssv18323808	deletion	OSC1772	SNP array	Probe signal intensity	9
nssv18323811	deletion	OSC1774	SNP array	Probe signal intensity	nssv18325109, nssv18325397, nssv18323812

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18282110	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18282617	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18283584	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18284141	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18284970	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18285149	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18285384	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18288291	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18288738	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18289646	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18290651	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18291155	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18291447	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18292327	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18292730	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18293693	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18294118	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18294203	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18294683	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18295114	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18295700	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18296071	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18296896	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18297548	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18297635	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18298631	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18298794	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18299505	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18299624	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18299887	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18300266	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18301982	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18321518	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18321590	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18322548	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18322567	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18322662	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18323410	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18323520	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18323808	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18323811	Remapped	Perfect	NC_000015.10:g.(?_ 43598211)_(4364746 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,598,211	43,647,461
nssv18282110	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18282617	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18283584	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18284141	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18284970	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18285149	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18285384	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18288291	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18288738	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18289646	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18290651	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18291155	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18291447	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18292327	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18292730	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18293693	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18294118	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18294203	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18294683	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18295114	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18295700	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18296071	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18296896	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18297548	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18297635	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18298631	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18298794	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18299505	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18299624	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18299887	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18300266	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18301982	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18321518	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18321590	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18322548	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18322567	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18322662	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18323410	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18323520	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18323808	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659
nssv18323811	Submitted genomic		NC_000015.9:g.(?_4 3890409)_(43939659 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,890,409	43,939,659

dbVar

Database of genomic structural variation

nsv6623256

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Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant