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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001258410.1 → NP_001245339.1 snRNA-activating protein complex subunit 4
See identical proteins and their annotated locations for NP_001245339.1
Status: PROVISIONAL
- Source sequence(s)
-
JQ434101
- UniProtKB/TrEMBL
-
I1V1W6
- Conserved Domains (4) summary
-
- smart00717
Location:373 → 424
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam00249
Location:428 → 474
- Myb_DNA-binding; Myb-like DNA-binding domain
- pfam13921
Location:376 → 439
- Myb_DNA-bind_6; Myb-like DNA-binding domain
- cl21498
Location:316 → 369
- SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCz11 Primary Assembly
Genomic
-
NC_007116.7 Reference GRCz11 Primary Assembly
- Range
-
51168832..51198529 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_009301777.3 → XP_009300052.1 snRNA-activating protein complex subunit 4 isoform X1
- UniProtKB/TrEMBL
-
A0A8M3ASS0
- Conserved Domains (4) summary
-
- smart00717
Location:410 → 461
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam00249
Location:465 → 511
- Myb_DNA-binding; Myb-like DNA-binding domain
- pfam13921
Location:413 → 476
- Myb_DNA-bind_6; Myb-like DNA-binding domain
- cl21498
Location:353 → 406
- SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
-
XM_021476210.1 → XP_021331885.1 snRNA-activating protein complex subunit 4 isoform X2
- UniProtKB/TrEMBL
- A0A0R4IFN5, A0A8M6Z6X7, F1QVS5
- Related
- ENSDARP00000088244.5, ENSDART00000097473.5
- Conserved Domains (5) summary
-
- pfam00249
Location:428 → 474
- Myb_DNA-binding; Myb-like DNA-binding domain
- pfam13921
Location:376 → 439
- Myb_DNA-bind_6; Myb-like DNA-binding domain
- cl21498
Location:316 → 369
- SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
- cl25732
Location:5 → 150
- SMC_N; RecF/RecN/SMC N terminal domain
- cl28544
Location:426 → 539
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
-
XM_021476209.1 → XP_021331884.1 snRNA-activating protein complex subunit 4 isoform X2
- UniProtKB/TrEMBL
- A0A0R4IFN5, A0A8M6Z6X7, F1QVS5
- Conserved Domains (5) summary
-
- pfam00249
Location:428 → 474
- Myb_DNA-binding; Myb-like DNA-binding domain
- pfam13921
Location:376 → 439
- Myb_DNA-bind_6; Myb-like DNA-binding domain
- cl21498
Location:316 → 369
- SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
- cl25732
Location:5 → 150
- SMC_N; RecF/RecN/SMC N terminal domain
- cl28544
Location:426 → 539
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
-
XM_017356122.2 → XP_017211611.2 snRNA-activating protein complex subunit 4 isoform X2
- UniProtKB/TrEMBL
- A0A0R4IFN5, A0A8M6Z6X7, F1QVS5
- Related
- ENSDARP00000132199.1, ENSDART00000165870.2
- Conserved Domains (5) summary
-
- pfam00249
Location:428 → 474
- Myb_DNA-binding; Myb-like DNA-binding domain
- pfam13921
Location:376 → 439
- Myb_DNA-bind_6; Myb-like DNA-binding domain
- cl21498
Location:316 → 369
- SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
- cl25732
Location:5 → 150
- SMC_N; RecF/RecN/SMC N terminal domain
- cl28544
Location:426 → 539
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
Reference GRCz11 ALT_DRER_TU_1
Genomic
-
NW_018394610.1 Reference GRCz11 ALT_DRER_TU_1
- Range
-
299752..315471 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCz11 ALT_DRER_TU_1
Genomic
-
NW_018394611.1 Reference GRCz11 ALT_DRER_TU_1
- Range
-
3202..12583 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)