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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001316321.3 → NP_001303250.1 coiled-coil domain-containing protein 57 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate exon in the 5' UTR, lacks several 3' exons and has a 3' end that extends into an intron compared to variant 1. The resulting isoform (3) has a shorter and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AC129510, AC132872, AF007146, BC040264, HY095706
- Consensus CDS
-
CCDS11803.1
- UniProtKB/Swiss-Prot
-
Q2TAC2
- Related
- ENSP00000376154.3, ENST00000392343.3
- Conserved Domains (2) summary
-
- COG1196
Location:9 → 351
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:222 → 549
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
NM_001367828.2 → NP_001354757.1 coiled-coil domain-containing protein 57 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC129510, AC132872, AC135056
-
NM_001394669.1 → NP_001381598.1 coiled-coil domain-containing protein 57 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC129510, AC132872, AC135056
- Consensus CDS
-
CCDS92420.1
- UniProtKB/TrEMBL
-
A0A590UJT6
- Related
- ENSP00000511565.1, ENST00000694881.1
- Conserved Domains (3) summary
-
- PHA03247
Location:811 → 1019
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:9 → 351
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:222 → 549
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
NM_001394670.1 → NP_001381599.1 coiled-coil domain-containing protein 57 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC129510, AC132872, AC135056
- Consensus CDS
-
CCDS92420.1
- UniProtKB/TrEMBL
-
A0A590UJT6
- Conserved Domains (3) summary
-
- PHA03247
Location:811 → 1019
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:9 → 351
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:222 → 549
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
NM_198082.4 → NP_932348.2 coiled-coil domain-containing protein 57 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC132872, AK074059, AW338721, BC110997, BE146089
- Consensus CDS
-
CCDS92419.1
- UniProtKB/Swiss-Prot
- A6NP51, A8MQC7, Q2TAC2, Q8IWG2, Q8TER3
- Related
- ENSP00000374292.5, ENST00000389641.9
- Conserved Domains (2) summary
-
- COG1196
Location:9 → 351
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:222 → 549
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000017.11 Reference GRCh38.p14 Primary Assembly
- Range
-
82101470..82212842 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047435774.1 → XP_047291730.1 coiled-coil domain-containing protein 57 isoform X11
- UniProtKB/TrEMBL
-
A0A590UJT6
- Related
- ENSP00000499556.1, ENST00000665763.1
-
XM_047435773.1 → XP_047291729.1 coiled-coil domain-containing protein 57 isoform X10
-
XM_047435770.1 → XP_047291726.1 coiled-coil domain-containing protein 57 isoform X8
-
XM_047435769.1 → XP_047291725.1 coiled-coil domain-containing protein 57 isoform X6
-
XM_017024463.3 → XP_016879952.2 coiled-coil domain-containing protein 57 isoform X3
-
XM_047435775.1 → XP_047291731.1 coiled-coil domain-containing protein 57 isoform X16
-
XM_047435779.1 → XP_047291735.1 coiled-coil domain-containing protein 57 isoform X20
-
XM_047435772.1 → XP_047291728.1 coiled-coil domain-containing protein 57 isoform X9
-
XM_011523549.4 → XP_011521851.1 coiled-coil domain-containing protein 57 isoform X7
See identical proteins and their annotated locations for XP_011521851.1
- Conserved Domains (2) summary
-
- COG1196
Location:9 → 351
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:222 → 549
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_011523548.4 → XP_011521850.1 coiled-coil domain-containing protein 57 isoform X7
See identical proteins and their annotated locations for XP_011521850.1
- Conserved Domains (2) summary
-
- COG1196
Location:9 → 351
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:222 → 549
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_017024469.3 → XP_016879958.1 coiled-coil domain-containing protein 57 isoform X12
-
XM_047435771.1 → XP_047291727.1 coiled-coil domain-containing protein 57 isoform X9
-
XM_011523551.4 → XP_011521853.1 coiled-coil domain-containing protein 57 isoform X7
See identical proteins and their annotated locations for XP_011521853.1
- Conserved Domains (2) summary
-
- COG1196
Location:9 → 351
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:222 → 549
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_047435766.1 → XP_047291722.1 coiled-coil domain-containing protein 57 isoform X4
-
XM_047435768.1 → XP_047291724.1 coiled-coil domain-containing protein 57 isoform X4
-
XM_017024467.3 → XP_016879956.1 coiled-coil domain-containing protein 57 isoform X7
- Conserved Domains (2) summary
-
- COG1196
Location:9 → 351
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:222 → 549
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_017024462.3 → XP_016879951.1 coiled-coil domain-containing protein 57 isoform X2
-
XM_047435765.1 → XP_047291721.1 coiled-coil domain-containing protein 57 isoform X1
-
XM_047435767.1 → XP_047291723.1 coiled-coil domain-containing protein 57 isoform X4
-
XM_024450704.2 → XP_024306472.1 coiled-coil domain-containing protein 57 isoform X13
- Conserved Domains (1) summary
-
- cl25732
Location:16 → 362
- SMC_N; RecF/RecN/SMC N terminal domain
-
XM_011523555.4 → XP_011521857.1 coiled-coil domain-containing protein 57 isoform X13
See identical proteins and their annotated locations for XP_011521857.1
- Conserved Domains (1) summary
-
- cl25732
Location:16 → 362
- SMC_N; RecF/RecN/SMC N terminal domain
-
XM_047435777.1 → XP_047291733.1 coiled-coil domain-containing protein 57 isoform X18
-
XM_011523557.4 → XP_011521859.1 coiled-coil domain-containing protein 57 isoform X22
See identical proteins and their annotated locations for XP_011521859.1
- Conserved Domains (1) summary
-
- TIGR02168
Location:7 → 344
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_047435778.1 → XP_047291734.1 coiled-coil domain-containing protein 57 isoform X19
-
XM_017024473.2 → XP_016879962.2 coiled-coil domain-containing protein 57 isoform X14
-
XM_017024464.3 → XP_016879953.2 coiled-coil domain-containing protein 57 isoform X5
-
XM_047435776.1 → XP_047291732.1 coiled-coil domain-containing protein 57 isoform X17
-
XM_017024474.3 → XP_016879963.2 coiled-coil domain-containing protein 57 isoform X15
-
XM_047435780.1 → XP_047291736.1 coiled-coil domain-containing protein 57 isoform X21
-
XM_047435781.1 → XP_047291737.1 coiled-coil domain-containing protein 57 isoform X23
-
XM_047435782.1 → XP_047291738.1 coiled-coil domain-containing protein 57 isoform X24
-
XM_047435783.1 → XP_047291739.1 coiled-coil domain-containing protein 57 isoform X25
RNA
-
XR_001752485.3 RNA Sequence
-
XR_007065291.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060941.1 Alternate T2T-CHM13v2.0
- Range
-
82968627..83080766 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054315747.1 → XP_054171722.1 coiled-coil domain-containing protein 57 isoform X11
-
XM_054315746.1 → XP_054171721.1 coiled-coil domain-containing protein 57 isoform X10
-
XM_054315745.1 → XP_054171720.1 coiled-coil domain-containing protein 57 isoform X8
-
XM_054315744.1 → XP_054171719.1 coiled-coil domain-containing protein 57 isoform X6
-
XM_054315741.1 → XP_054171716.1 coiled-coil domain-containing protein 57 isoform X3
-
XM_054315750.1 → XP_054171725.1 coiled-coil domain-containing protein 57 isoform X27
-
XM_054315753.1 → XP_054171728.1 coiled-coil domain-containing protein 57 isoform X20
-
XM_054315743.1 → XP_054171718.1 coiled-coil domain-containing protein 57 isoform X26
-
XM_054315742.1 → XP_054171717.1 coiled-coil domain-containing protein 57 isoform X5
-
XM_054315752.1 → XP_054171727.1 coiled-coil domain-containing protein 57 isoform X19
-
XM_054315748.1 → XP_054171723.1 coiled-coil domain-containing protein 57 isoform X14
-
XM_054315751.1 → XP_054171726.1 coiled-coil domain-containing protein 57 isoform X17
-
XM_054315749.1 → XP_054171724.1 coiled-coil domain-containing protein 57 isoform X15
-
XM_054315754.1 → XP_054171729.1 coiled-coil domain-containing protein 57 isoform X23
-
XM_054315755.1 → XP_054171730.1 coiled-coil domain-containing protein 57 isoform X24
-
XM_054315756.1 → XP_054171731.1 coiled-coil domain-containing protein 57 isoform X25
RNA
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XR_008484806.1 RNA Sequence
-
XR_008484807.1 RNA Sequence
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_152675.1: Suppressed sequence
- Description
- NM_152675.1: This RefSeq was permanently suppressed because it contains the wrong (incomplete) CDS.