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    gtf3c6 general transcription factor IIIC, polypeptide 6, alpha [ Danio rerio (zebrafish) ]

    Gene ID: 393232, updated on 27-Mar-2024

    Summary

    Official Symbol
    gtf3c6provided by ZNC
    Official Full Name
    general transcription factor IIIC, polypeptide 6, alphaprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1009
    See related
    Ensembl:ENSDARG00000043301 AllianceGenome:ZFIN:ZDB-GENE-040426-1009
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:56388
    Summary
    Predicted to be involved in transcription by RNA polymerase III. Predicted to be part of transcription factor TFIIIC complex. Orthologous to human GTF3C6 (general transcription factor IIIC subunit 6). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See gtf3c6 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (17252487..17253389)
    105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (17344510..17345412)

    Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene natriuretic peptide C-like Neighboring gene NOP2 nucleolar protein homolog (yeast) Neighboring gene EMG1 N1-specific pseudouridine methyltransferase Neighboring gene Kell metallo-endopeptidase (Kell blood group)

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    general transcription factor 3C polypeptide 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200262.1NP_956556.1  general transcription factor 3C polypeptide 6

      See identical proteins and their annotated locations for NP_956556.1

      Status: PROVISIONAL

      Source sequence(s)
      BC049013
      UniProtKB/TrEMBL
      Q7ZUJ5
      Related
      ENSDARP00000063571.5, ENSDART00000063572.7
      Conserved Domains (1) summary
      pfam10419
      Location:3265
      TFIIIC_sub6; TFIIIC subunit

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007127.7 Reference GRCz11 Primary Assembly

      Range
      17252487..17253389
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)