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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus
GSE38571	Integrated transcriptomic and epigenomic analysis of primary human lung cell differentiation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	38		BED TXT	Crystal N Marconett	Apr 15, 2013
GSE42776	Genome-wide analysis of acetylated H4K5 binding offers new insights into the acute and chronic effects of METH on gene expression in the dorsal striatum	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	5		BED WIG SRA Run Selector	Jean Lud Cadet	Feb 28, 2013
GSE42447	Activation of the chromatin-remodeling factor Smarca4/Brg1 cooperates with Olig2 to establish oligodendrocyte identity and control CNS myelination [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	17		BED SRA Run Selector	Yang Yu	Jan 20, 2013
GSE42454	Activation of the chromatin-remodeling factor Smarca4/Brg1 cooperates with Olig2 to establish oligodendrocyte identity and control CNS myelination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	19		BED	Yang Yu	Jan 20, 2013
GSE42478	Defining a molecular roadmap of cellular reprogramming into iPS cells	Expression profiling by array Non-coding RNA profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by genome tiling array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Merkel cell polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4	61		BIGWIG CEL PAIR TXT	Ben S. Wittner	Dec 20, 2012
GSE42207	Rodent trophoblast epigenome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	26		BED TXT SRA Run Selector	Edward Chuong	Dec 04, 2012
GSE41217	Acute Stress Induced Increase in Histone H3 Lys 9 Trimetylation in Rat Hippocampus	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	3		WIG SRA Run Selector	Richard G. Hunter	Nov 02, 2012
GSE40431	Dual-mode modulation of Smad signaling by Smad-interacting protein Sip1 is required for myelination in the central nervous system	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Mus musculus Rattus norvegicus	6		CEL CHP WIG	Qing Richard Lu	Aug 31, 2012
GSE40506	Genome-wide mapping of Olig2 targets in primary oligodendrocytes	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2		WIG SRA Run Selector	Qing Richard Lu	Aug 31, 2012
GSE26871	Genome wide profiling of PAX8 binding stes in PCCL3 rat cells	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2		BED WIG SRA Run Selector	Pilar Santisteban	Jun 28, 2012
GSE26938	Global analysis of in vivo Pax8-binding sites in rat thyroid cells using high-throughput technologies: Chip-Seq and whole genome expression arrays	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Rattus norvegicus	18		BED TXT WIG	Pilar Santisteban	Jun 28, 2012
GSE35132	Genome-wide analysis of EGR2/SOX10 binding in myelinating peripheral nerve	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	8		WIG SRA Run Selector	John Svaren	Apr 01, 2012
GSE27580	An interspecies analysis reveals sequence determinants of the bivalent chromatin state	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	2		SAM	Magnus David Lynch	Nov 16, 2011
GSE28782	Chromatin occupancy of TCF7L2 in hepatocytes	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2		BAM TXT SRA Run Selector	Luke Norton	Sep 12, 2011
GSE22878	Rapid transcription of arc/arg3.1 and other very fast immediate early genes in response to neuronal activity is mediated by a stalled RNA polymerase II mechanism	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	1		BED SRA Run Selector	Ramendra N Saha	May 24, 2011
GSE21068	Estrogen-mediated Epigenetic Repression of Large Chromosomal Regions through DNA Looping	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by genome tiling array Expression profiling by array	Homo sapiens Rattus norvegicus	12		GFF PAIR TXT WIG SRA Run Selector	Pei-Yin Hsu	Apr 29, 2010