GEO Browser - GEO

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45 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL20156
GSE160944	Leveraging histone modifications to improve genome annotation	Genome binding/occupancy profiling by high throughput sequencing	Glycine max Zea mays	6	BED SRA Run Selector	Robert J Schmitz	Apr 26, 2021
GSE172479	AGO104 is an RdDM effector of paramutation at the maize b1 locus	Non-coding RNA profiling by high throughput sequencing	Zea mays	7	BED SRA Run Selector	Daniel Grimanelli	Apr 22, 2021
GSE156986	Predominantly inverse modulation of gene expression in genomically unbalanced disomic haploid maize	Expression profiling by high throughput sequencing Other	Zea mays	153	TXT SRA Run Selector	James Birchler	Feb 22, 2021
GSE149186	Genomic imbalance determines positive and negative modulation of gene expression in diploid maize	Expression profiling by high throughput sequencing Other	Zea mays	218	TXT SRA Run Selector	Xiaowen Shi	Feb 02, 2021
GSE152046	Stable unmethylated DNA demarcates expressed genes and their cis-regulatory space in plant genomes	Genome binding/occupancy profiling by high throughput sequencing	Zea mays	2	BED TXT SRA Run Selector	Robert J Schmitz	Aug 22, 2020
GSE138962	Heat-killed Fusarium-elicited B73 and Mo17 stems for 36 h	Expression profiling by high throughput sequencing	Zea mays	15	XLSX SRA Run Selector	Alisa Huffaker	Jul 08, 2020
GSE142847	ADHERENT1 IS A 3-KETOACYL CoA SYNTHASE REQUIRED FOR MAIZE CUTICLE DEVELOPMENT AND ORGAN SEPARATION	Genome binding/occupancy profiling by high throughput sequencing	Zea mays	1	BIGWIG NARROWPEAK SRA Run Selector	Andrea Gallavotti	Jun 01, 2020
GSE134936	Magnitude of modulation of gene expression in aneuploid maize depends on the extent of genomic imbalance	Expression profiling by high throughput sequencing Other	Zea mays	29	TXT XLSX SRA Run Selector	James A Birchler	Feb 17, 2020
GSE120304	Widespread Long-range Cis-Regulatory Elements in the Maize Genome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Zea mays	81	BED TSV TXT SRA Run Selector	Robert J Schmitz	Sep 19, 2019
GSE128434	The prevalence, evolution and chromatin signatures of plant regulatory elements	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana Asparagus officinalis Brachypodium distachyon Eutrema salsugineum Glycine max Hordeum vulgare Oryza sativa Phaseolus vulgaris Populus trichocarpa Setaria viridis Sorghum bicolor Spirodela polyrhiza Zea mays	170	BW SRA Run Selector	Robert J Schmitz	Sep 19, 2019
GSE93983	Genome-wide identification of AGO18b-bound miRNAs and phasiRNAs in maize by cRIP-seq	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Zea mays	18	XLSX SRA Run Selector	Dong Chen	Aug 07, 2019
GSE129683	needle1 (ndl1) encodes a mitochondria localized ATPase required for thermotolerant maize growth [greenhouse]	Expression profiling by high throughput sequencing	Zea mays	6	CSV SRA Run Selector	Andrea Gallavotti	Aug 06, 2019
GSE129684	needle1 (ndl1) encodes a mitochondria localized ATPase required for thermotolerant maize growth	Expression profiling by high throughput sequencing	Zea mays	15		Andrea Gallavotti	Aug 06, 2019
GSE120135	Multiple genes recruited from hormone pathways partition maize diterpenoid defences.	Expression profiling by high throughput sequencing	Zea mays	8	TXT SRA Run Selector	Robert J Schmitz	Jul 01, 2019
GSE128896	Changes in the maize (B73) 1-cm primary root growth zone transcriptome induced by mild (-0.03 MPa) or severe water-deficit stress (-1.6 MPa)	Expression profiling by high throughput sequencing	Zea mays	9	CSV SRA Run Selector	Melvin John Oliver	Apr 30, 2019
GSE123147	Gene expression in developing ears of ra3;tpp4 maize mutants compared to wild-type	Expression profiling by high throughput sequencing	Zea mays	6	TXT SRA Run Selector	Hannes Claeys	Nov 29, 2018
GSE115498	Rel2-mediated transcriptional repression regulates vegetative and reproductive architecture in maize	Expression profiling by high throughput sequencing	Zea mays	6	TXT SRA Run Selector	Andrea Gallavotti	Nov 02, 2018
GSE111792	THE DNA BINDING LANDSCAPE OF THE MAIZE AUXIN RESPONSE FACTOR FAMILY [RNA-seq]	Expression profiling by high throughput sequencing	Zea mays	6	TXT SRA Run Selector	Andrea Gallavotti	Sep 14, 2018
GSE111795	THE DNA BINDING LANDSCAPE OF THE MAIZE AUXIN RESPONSE FACTOR FAMILY [DAP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Zea mays	15	BIGWIG NARROWPEAK SRA Run Selector	Andrea Gallavotti	Sep 14, 2018
GSE111857	THE DNA BINDING LANDSCAPE OF THE MAIZE AUXIN RESPONSE FACTOR FAMILY	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Zea mays	21	BIGWIG NARROWPEAK	Andrea Gallavotti	Sep 14, 2018