GEO Browser - GEO

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256 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus
GSE183842	Single cell transcriptomics and chromatin accessibility profiling elucidate the kidney protective mechanism of mineralocorticoid receptor antagonism	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	47		Katalin Susztak	Nov 17, 2023
GSE197926	TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Hylobates moloch Macaca mulatta Mus caroli Mus musculus Mus pahari Nomascus leucogenys Rattus norvegicus	85	BED BEDGRAPH BIGWIG BW COOL XLSX	Mariam Okhovat	Oct 20, 2023
GSE232960	Transcription factor NFYa controls cardiomyocyte metabolism and proliferation during fetal heart development [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	6	BW	Miao Cui	Oct 13, 2023
GSE232963	Transcription factor NFYa controls cardiomyocyte metabolism and proliferation during fetal heart development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus Rattus norvegicus	12	BW H5 PNG	Miao Cui	Oct 13, 2023
GSE245064	STAT1 deficiency underlies a proinflammatory imprint of naive CD4+ T cells in spondyloarthritis [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	18	BW NARROWPEAK	Frédéric Crémazy	Oct 11, 2023
GSE245067	STAT1 deficiency underlies a proinflammatory imprint of naive CD4+ T cells in spondyloarthritis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	44	BW NARROWPEAK	Frédéric Crémazy	Oct 11, 2023
GSE244563	Role of ZHX2 in VSMCs [Chip-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	NARROWPEAK	思源樊	Oct 07, 2023
GSE244565	Role of ZHX2 in VSMCs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	8	NARROWPEAK	思源樊	Oct 07, 2023
GSE242357	MoTrPAC - Endurance Exercise Training Study In 6 Months Old Rats [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	416	CSV TXT	Euan Ashley	Sep 30, 2023
GSE242358	MoTrPAC: Endurance Exercise Training Study In 6 Months Old Rats	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Rattus norvegicus	1747	COV TXT	Euan Ashley	Sep 30, 2023
GSE158760	ChIP-seq data from pika Epas1 knock in MAF and RNA-seq data from mouse, rat, rabbit and Tibetan pika fibroblasts	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus Ochotona curzoniae Oryctolagus cuniculus Rattus norvegicus	18	BW TXT SRA Run Selector	wang jiawen	Sep 29, 2023
GSE205837	Disrupted propionate metabolism evokes transcriptional changes in the heart by increasing histone acetylation and propionylation [ChIP-Seq 2]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	4	BIGWIG	Pawel Swietach	Sep 28, 2023
GSE205838	Disrupted propionate metabolism evokes transcriptional changes in the heart by increasing histone acetylation and propionylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	41	BIGWIG	Pawel Swietach	Sep 28, 2023
GSE211337	The transcription factor Stat-1 is essential for Schwann cell differentiation, myelination and myelin sheath regeneration [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BIGWIG NARROWPEAK	Yun Gu	Sep 11, 2023
GSE211338	The transcription factor Stat-1 is essential for Schwann cell differentiation, myelination and myelin sheath regeneration	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	8		Yun Gu	Sep 11, 2023
GSE212416	A single-cell atlas of gene expression and chromatin accessibility changes associated with cocaine addiction in the rat amygdala [snATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	12	BED CSV MTX RDS TBI TSV	Jessica Lu Zhou	Aug 09, 2023
GSE212417	Cocaine addiction-like behaviors are associated with long-term changes in gene regulation, energy metabolism, and GABAergic inhibition within the amygdala	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	35	BED CSV MTX TAR TBI TSV	Jessica Lu Zhou	Aug 09, 2023
GSE235317	A single-cell atlas of gene expression and chromatin accessibility changes associated with cocaine addiction in the rat amygdala (snATAC-Seq Multiome)	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	TAR	Jessica Lu Zhou	Aug 09, 2023
GSE157498	Developmental Reprogramming of Myometrial Stem Cells by Endocrine Disruptor Linking to Risk of Uterine Fibroids [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	4	TDF SRA Run Selector	Qiwei Yang	Aug 07, 2023
GSE157503	Developmental Reprogramming of Myometrial Stem Cells by Endocrine Disruptor Linking to Risk of Uterine Fibroids	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Rattus norvegicus	8	BEDGRAPH TDF	Qiwei Yang	Aug 07, 2023