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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter						BED	yijing zhang
GSE198284	Subgenome-specific usage of transposable element-derived promoters and enhancers in bread wheat development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other Non-coding RNA profiling by high throughput sequencing	Triticum aestivum Triticum urartu	56		BED BW TXT	yijing zhang	Oct 12, 2023
GSE192815	Death and birth of transposable elements underlie subgenome convergent and divergent transcription in common wheat	Genome binding/occupancy profiling by high throughput sequencing	Triticum aestivum	194		BED BW	yijing zhang	Oct 08, 2022
GSE178372	Distinct chromatin signatures and transcriptional landscape of functional genetic elements in allohexaploid wheat	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Triticum aestivum	27		BED BEDGRAPH BW TXT	yijing zhang	Jun 17, 2021
GSE139019	An atlas of wheat epigenetic regulatory elements reveals subgenome-divergence in the regulation of development and stress responses	Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Triticum aestivum	124		BED BW TXT SRA Run Selector	yijing zhang	Feb 04, 2021
GSE139020	Homology-mediated inter-chromosomal interactions in hexaploid wheat lead to specific subgenome territories following polyploidization and introgression	Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Triticum aestivum	9		BED TDF TXT SRA Run Selector	yijing zhang	Nov 30, 2020
GSE121903	Distinct chromatin signitures of promoters, enhancers and transposons in allohexaploid wheat	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Triticum aestivum	18		BED BW TXT SRA Run Selector	yijing zhang	Jun 21, 2019
GSE98301	H3K27 tri-methyltransferases CLF and SWN redundantly buffer ABA-induced senescence	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	20		BED TXT SRA Run Selector	yijing zhang	Dec 14, 2018
GSE107827	de novo re-construction of the core genome from ChIP-Seq for large-genome organisms	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Oryza sativa Oryza sativa Indica Group Oryza sativa Japonica Group Triticum aestivum	26		BED TXT SRA Run Selector	yijing zhang	May 27, 2018
GSE67322	Arabidopsis Flower and Embryo Developmental Genes are Repressed in Seedlings by Different Combinations of Polycomb Group Proteins in Association with Distinct Sets of Cis-regulatory Elements	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	29		BED TXT XLS SRA Run Selector	yijing zhang	Jan 19, 2016