GEO Browser - GEO

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19 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by genome tiling array			BEDGRAPH
GSE224459	TET1 catalytic activity is required for reprogrammign of imprinting control regions and the patterning of sperm-specific hypomethylated regions	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by genome tiling array	Mus musculus	63	BEDGRAPH BW CSV IDAT NARROWPEAK	Rexxi Diptya Prasasya	Feb 26, 2024
GSE252723	Endocrine disruptor-induced epimutagenesis in vitro: Insight into molecular mechanisms	Other Expression profiling by high throughput sequencing Methylation profiling by genome tiling array	Mus musculus	84	BEDGRAPH IDAT	Jake Dean Lehle	Jan 31, 2024
GSE222595	Integrative genomic analyses in adipocytes implicate DNA methylation in human obesity and diabetes	Methylation profiling by genome tiling array	Homo sapiens	192	BEDGRAPH IDAT TXT	William Robert Scott	Apr 14, 2023
GSE199214	The steroid hormone estriol (E3) regulates epigenetic programming of fetal mouse brain and reproductive tract	Expression profiling by array Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	24	BEDGRAPH CEL CHP GFF	Yuping Zhou	Mar 31, 2022
GSE94962	H9-hESC derived human neural stem cells with combinations of mutant IDH1-R132H overexpression, P53 shRNA knockdown and/or ATRX shRNA knockdown	Expression profiling by high throughput sequencing Methylation profiling by genome tiling array Other	Homo sapiens	20	BEDGRAPH IDAT	Aram S Modrek	Nov 09, 2017
GSE85942	Large-Scale Atlas of Mutant IDH1-Dependent Chromatin State Reprogramming, Reversibility, and Persistence	Methylation profiling by genome tiling array Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	211	BEDGRAPH CEL IDAT	Vladimir Makarov	Aug 23, 2017
GSE85467	Epigenomic Profiling of Primary Gastric Adenocarcinoma Reveals Super-enhancer Heterogeneity	Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by SNP array	Homo sapiens	259	BED BEDGRAPH CEL IDAT TXT	Aditi Qamra	Sep 28, 2016
GSE79262	Mechanisms and disease associations of haplotype-dependent allele specific DNA methylation	Methylation profiling by genome tiling array Genome variation profiling by SNP array Methylation profiling by high throughput sequencing	Homo sapiens	326	BEDGRAPH IDAT VCF	Benjamin Tycko	Mar 21, 2016
GSE63237	Dynamics of MBD2 deposition across methylated DNA regions during malignant transformation of human mammary epithelial cells	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Methylation profiling by genome tiling array	Homo sapiens	30	BED BEDGRAPH CEL	Robert Dante	Jun 17, 2015
GSE51634	Prenatal stress-induced programming of genome-wide promoter DNA methylation in 5-Htt deficient mice	Methylation profiling by genome tiling array	Mus musculus	22	BED BEDGRAPH CEL	Claus Juergen Scholz	Nov 18, 2014
GSE56454	Seminoma and embryonal carcinoma footprints identified by analysis of integrated genome-wide epigenetic and expression profiles of germ cell cancer cell lines	Expression profiling by array Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	10	BEDGRAPH TXT	Martin Anne Rijlaarsdam	Jun 01, 2014
GSE49044	DNA unmethylome profiling by covalent capture of CpG sites (microarray)	Methylation profiling by genome tiling array Other	Homo sapiens	90	BED BEDGRAPH CEL	Viviane Labrie	Aug 27, 2013
GSE46954	Default DNA Methylation is Preceded by Broad, Low-Level Transcription in Fetal Male Germ Cells and Is Inversely Patterned by Dynamic H3K4 Methylation	Genome binding/occupancy profiling by genome tiling array Methylation profiling by genome tiling array Expression profiling by high throughput sequencing	Mus musculus	63	BEDGRAPH GFF PAIR TXT	Xiwei Wu	Jul 31, 2013
GSE37680	Genome-wide analysis of the cytosine methylation profile in Arabidopsis thaliana crown galls	Methylation profiling by genome tiling array	Arabidopsis thaliana	6	BED BEDGRAPH CEL	Claus Juergen Scholz	Feb 18, 2013
GSE40540	IP of 5-hydroxymethylcytosine (5-hmC) and 5-methylcytosine (5-mC) enriched DNA fragments from control and PB treated mouse livers	Methylation profiling by genome tiling array Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	153	BEDGRAPH CEL PAIR	John Paterson Thomson	Sep 12, 2012
GSE27537	LATE-REPLICATING HETEROCHROMATIN IS CHARACTERISED BY DECREASED CYTOSINE METHYLATION IN THE HUMAN GENOME (HELP assay)	Methylation profiling by genome tiling array	Homo sapiens	2	BEDGRAPH PAIR TXT	John Greally	Aug 06, 2011
GSE27538	LATE-REPLICATING HETEROCHROMATIN IS CHARACTERISED BY DECREASED CYTOSINE METHYLATION IN THE HUMAN GENOME	Expression profiling by array Methylation profiling by genome tiling array	Homo sapiens	4	BEDGRAPH PAIR	John Greally	Aug 06, 2011
GSE19884	Changes in H2A.Z occupancy and DNA methylation during B-cell lymphomagenesis	Expression profiling by genome tiling array Methylation profiling by genome tiling array Genome binding/occupancy profiling by genome tiling array	Mus musculus	20	BEDGRAPH CALLS GFF PAIR	Jorja Henikoff	Aug 09, 2010
GSE14570	Extensive demethylation of repetitive elements during seed development underlies gene imprinting	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Arabidopsis thaliana	10	BEDGRAPH GFF PAIR TXT SRA Run Selector	Jorja Henikoff	Jun 12, 2009