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Series GSE224459 Query DataSets for GSE224459
Status Public on Feb 26, 2024
Title TET1 catalytic activity is required for reprogrammign of imprinting control regions and the patterning of sperm-specific hypomethylated regions
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by genome tiling array
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
Web link https://www.sciencedirect.com/science/article/pii/S1534580724001448?via%3Dihub
 
Citation(s) 38569549
Submission date Feb 03, 2023
Last update date May 28, 2024
Contact name Rexxi Diptya Prasasya
E-mail(s) rexxi.prasasya@pennmedicine.upenn.edu
Organization name University of Pennsylvania
Department Cell and Developmental Biology
Lab Bartolomei Lab
Street address 3400 Civic Center Blvd
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platforms (3)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
GPL31950 Infinium MouseMethylation285 BeadChip
GPL32159 NextSeq 1000 (Mus musculus)
Samples (63)
GSM7020157 genomic DNA from Tet1-HxD sperm 1
GSM7020158 genomic DNA from Tet1-HxD sperm 2
GSM7020159 genomic DNA from Tet1-HxD sperm 3
This SuperSeries is composed of the following SubSeries:
GSE224349 TET1 catalytic activity is required for reprogrammign of imprinting control regions and the patterning of sperm-specific hypomethylated regions [Mouse Methylation285 12v1-0 BeadChip]
GSE224458 TET1 catalytic activity is required for reprogrammign of imprinting control regions and the patterning of sperm-specific hypomethylated regions [CUT&RUN]
GSE249772 TET1 catalytic activity is required for reprogrammign of imprinting control regions and the patterning of sperm-specific hypomethylated regions [RNA-Seq]
Relations
BioProject PRJNA931281

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE224459_RAW.tar 718.5 Mb (http)(custom) TAR (of BEDGRAPH, BW, CSV, IDAT, NARROWPEAK)
SRA Run SelectorHelp

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