GEO Browser - GEO

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27 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Plasmodium falciparum		BW
GSE190497	PfAP2-P DNA-binding protein is a master regulator of parasite pathogenesis during malaria parasite blood stages (ChIP-Seq I)	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	11	BED BW	AMIT KUMAR SUBUDHI	Aug 07, 2023
GSE190519	PfAP2-P DNA-binding protein is a master regulator of parasite pathogenesis during malaria parasite blood stages	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	59	BED BW TAR	AMIT KUMAR SUBUDHI	Aug 07, 2023
GSE230206	PfAP2-P DNA-binding protein is a master regulator of parasite pathogenesis during malaria parasite blood stages (ChIP-Seq II)	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	32	BED BW	AMIT KUMAR SUBUDHI	Aug 07, 2023
GSE215426	Histone post translation modification differences during the Plasmodium schizont-to-ring transition [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium berghei Plasmodium falciparum	28	BW	Evelien M Bunnik	Jun 06, 2023
GSE215427	Transcriptional differences during the Plasmodium schizont-to-ring transition [RNA-seq]	Expression profiling by high throughput sequencing	Plasmodium falciparum	6	BW	Evelien M Bunnik	Jun 06, 2023
GSE215429	Histone post translation modification and Transcriptional differences during the Plasmodium schizont-to-ring transition	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Plasmodium berghei Plasmodium falciparum	34	BW	Evelien M Bunnik	Jun 06, 2023
GSE208757	Replication origin mapping in the malaria parasite Plasmodium falciparum	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	4	BW NARROWPEAK	Richard Bartfai	Jan 30, 2023
GSE210062	Global Profiling of Histone Modifications in Plasmodium falciparum using CUT&RUN.	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Plasmodium falciparum	9	BW TXT	Bjorn FC Kafsack	Aug 01, 2022
GSE202214	ChIP-Seq analysis of day 6 male and female gametocytes of the malaria parasite Plasmodium falciparum	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	54	BW	Michaela Petter	May 07, 2022
GSE184658	A coordinated regulatory network of ApiAP2 transcription factors involved in heterochromatic gene expression during Plasmodium falciparum blood-stage development [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	144	BED BW SRA Run Selector	Mei Jiang	Mar 06, 2022
GSE184659	A coordinated regulatory network of ApiAP2 transcription factors involved in heterochromatic gene expression during Plasmodium falciparum blood-stage development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	192	BED BW	Mei Jiang	Mar 06, 2022
GSE180437	Roles of PfAP2-EXP2 in Plasmodium falciparum blood-stage development [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	3	BED BW SRA Run Selector	Mei Jiang	Feb 02, 2022
GSE180438	Roles of PfAP2-EXP2 in Plasmodium falciparum blood-stage development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	15	BED BW	Mei Jiang	Feb 02, 2022
GSE186984	ChIPseq of the P. falciparum bromodomain proteins PfBDP7 and PfBDP1 in early and mature schizonts	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	10	BW SRA Run Selector	Michaela Petter	Nov 09, 2021
GSE149773	A transcriptional repressor programs gametocytogenesis in human malaria parasites (PfAP2-G5) [ChIP-Seq TF]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	18	BED BW SRA Run Selector	Shijun Shen	Aug 03, 2021
GSE149774	A transcriptional repressor programs gametocytogenesis in human malaria parasites (PfAP2-G5)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	117	BW	Shijun Shen	Aug 03, 2021
GSE157709	A transcriptional repressor programs gametocytogenesis in human malaria parasites (PfAP2-G5) [ChIP-Seq HM]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	12	BW SRA Run Selector	Shijun Shen	Aug 03, 2021
GSE141761	HMGB1 is required for virulence gene expression via configuration of genome architecture in Plasmodium falciparum [TF ChIP]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	6	BED BW SRA Run Selector	meng liu	Apr 14, 2021
GSE108716	Genome-wide mapping of RNAPII and its phosphoisoforms in Plasmodium falciparum	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	30	BED BEDGRAPH BW NARROWPEAK TXT XLS SRA Run Selector	Mark Stephen Featherstone	Dec 30, 2020
GSE143898	Actin-related protein Arp4 regulates euchromatic gene expression and development by H2A.Z deposition in blood-stage Plasmodium falciparum [Arp4/6 ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	10	BW SRA Run Selector	Xinyu Cui	Jun 24, 2020