GEO Browser - GEO

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42 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Mus musculus		IDAT
GSE269463	Genome-wide CRISPR-Cas9 knockout screens identify DNMT1 as a druggable dependency in sonic hedgehog medulloblastoma	Methylation profiling by genome tiling array Expression profiling by high throughput sequencing	Mus musculus	21	IDAT	Daniel J. Merk	Jun 13, 2024
GSE252459	Capmatinib shows superior efficacy for MET-fusion driven pediatric high-grade glioma and synergizes with radiotherapy.	Expression profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens Mus musculus	48	IDAT	Jared Andrews	Jun 12, 2024
GSE225318	Trophectoderm biopsies of blastocysts for preimplantation genetic testing following in vitro fertilization and embryo culture increases epigenetic dysregulation in a mouse model	Methylation profiling by genome tiling array Expression profiling by high throughput sequencing	Mus musculus	158	IDAT	Eric Alejandro Rhon Calderon	Apr 24, 2024
GSE240856	Maternal oxytocin treatment at birth increases epigenetic age in male offspring	Expression profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens Microtus ochrogaster Mus musculus Rattus norvegicus	14	IDAT	Joshua Danoff	Apr 03, 2024
GSE262713	Developmental priming of cancer susceptibility	Methylation profiling by genome tiling array Expression profiling by high throughput sequencing	Mus musculus	182	IDAT	Luca Fagnocchi	Mar 29, 2024
GSE247199	Multi-omics characterization of partial chemical reprogramming reveals evidence of cell rejuvenation	Methylation profiling by genome tiling array Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Rattus	60	IDAT	Wayne Mitchell	Mar 21, 2024
GSE239279	Loss of PPARα function promotes epigenetic dysregulation of lipid homeostasis driving ferroptosis and pyroptosis lipotoxicity in Metabolic Dysfunction Associated Steatotic Liver Disease (MASLD)	Methylation profiling by genome tiling array Expression profiling by high throughput sequencing	Mus musculus	24	IDAT	Claudia Theys	Mar 01, 2024
GSE252723	Endocrine disruptor-induced epimutagenesis in vitro: Insight into molecular mechanisms	Other Expression profiling by high throughput sequencing Methylation profiling by genome tiling array	Mus musculus	84	BEDGRAPH IDAT	Jake Dean Lehle	Jan 31, 2024
GSE253534	Activating transcription factors Atf3/Atf4 drive early molecular events preceding neural stem cell differentiation and control neuron formation	Expression profiling by array Expression profiling by high throughput sequencing	Mus musculus	67	IDAT	Rupert W Overall	Jan 18, 2024
GSE198232	Cytosolic pattern recognition receptors respond to EZH2-inhibition induced viral mimicry response that eliminates splenic B cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array	Mus musculus	70	BW CSV IDAT TXT	Frederick Andrew Dick	Oct 18, 2023
GSE227413	Mouse modeling of pediatric glioma, MYCN reveals intratumoral heterogeneity including neuronal and oligodendroglial lineage signatures	Expression profiling by high throughput sequencing Methylation profiling by array Methylation profiling by genome tiling array	Homo sapiens Mus musculus	29	IDAT TXT	Melanie Schoof	Sep 25, 2023
GSE242090	Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups	Expression profiling by high throughput sequencing Third-party reanalysis Methylation profiling by genome tiling array	Homo sapiens Mus musculus	69	IDAT MTX TAB TSV	Mamy Jean de Dieu ANDRIANTERANAGNA	Sep 20, 2023
GSE198450	UHRF1 is a mediator of KRAS driven oncogenesis in lung adenocarcinoma	Expression profiling by high throughput sequencing Methylation profiling by genome tiling array Other	Homo sapiens Mus musculus	163	IDAT	Alex G Lee	May 15, 2023
GSE224447	DNA methylation and gene expression changes in mice induced by parabiosis and recovery	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Methylation profiling by array	Homo sapiens Macaca mulatta Mus musculus Rattus Rattus norvegicus	233	COV IDAT TXT	Jesse Poganik	Apr 21, 2023
GSE224061	Epigenetic dosage identifies two major and functionally distinct β cell subtypes	Methylation profiling by genome tiling array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	80	BW IDAT	Luca Fagnocchi	Feb 16, 2023
GSE207266	Unified rhombic lip origins of Group 3 and Group 4 medulloblastoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array	Homo sapiens Mus musculus	68	IDAT NARROWPEAK	Kyle S Smith	Sep 23, 2022
GSE210763	DNA methyltransferase 3A controls intestinal epithelial barrier function and regeneration in the colon	Expression profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens Mus musculus	72	IDAT TXT	Neha Mishra	Sep 21, 2022
GSE155994	Comparative analysis of glioblastoma initiating cells and patient-matched EPSC-derived neural stem cells as a discovery tool and drug matching strategy	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens Mus musculus	156	COV IDAT	Silvia Marino	Sep 17, 2021
GSE131894	Renal circadian rhythm dysregulation in lupus nephritis	Expression profiling by array Expression profiling by high throughput sequencing	Mus musculus	117	IDAT TXT	Weijia Zhang	Sep 14, 2021
GSE181733	Transposon-triggered innate immune response confers cancer resistance to the blind mole rat	Expression profiling by high throughput sequencing Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus Nannospalax ehrenbergi Rattus norvegicus	110	IDAT TXT	Yang Zhao	Sep 09, 2021