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73 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster		NARROWPEAK
GSE268674	The pioneer transcription factor Zelda facilitates the exit from regeneration and restoration of patterning in Drosophila	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	8	BED BIGWIG NARROWPEAK	Rachel Smith-Bolton	Jun 26, 2024
GSE249374	Linker histone H1 regulates homeostasis of heterochromatin associated cRNAs [ChIP-Seq 3]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	8	NARROWPEAK XLSX	Oscar Reina Garcia	Apr 23, 2024
GSE243715	Minor splicing factor 65K/RNPC3 interacts with ANKRD11 and mediates HDAC3-regulated histone deacetylation and transcription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens	51	CSV NARROWPEAK TXT	Shaobo Liang	Mar 31, 2024
GSE239354	The interaction of MLE with CLAMP zinc finger domains is important for dosage compensation in Drosophila melanogaster	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	13	BEDGRAPH NARROWPEAK	Anastasia Revel-Muroz	Mar 20, 2024
GSE256533	Clock-dependent chromatin accessibility rhythms regulate circadian transcription	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	33	BW NARROWPEAK	Swathi Yadlapalli	Mar 05, 2024
GSE235505	Efficient trans-differentiation/ de-differentiation of mature intestinal cells in adult Drosophila midgut by depleting a single transcription factor	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	5	BW NARROWPEAK	xi rongwen	Mar 04, 2024
GSE222193	Transient loss of Polycomb components induces an epigenetic cancer fate	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Drosophila melanogaster	126	BROADPEAK BW NARROWPEAK TXT VCF	Vincent Loubiere	Feb 28, 2024
GSE226514	Iterative assay for transposase-accessible chromatin by sequencing to home in on functionally relevant neuronal subtypes	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	20	BW CSV NARROWPEAK	Adrian Rothenfluh	Feb 28, 2024
GSE253025	The density of regulatory information is a major determinant of evolutionary constraint on non-coding DNA in Drosophila [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	3	BW NARROWPEAK	Nicolas Frankel	Jan 16, 2024
GSE210427	Role of H3K4me1 and H3K27ac histone marks in aging Drosophila	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	16	BIGWIG NARROWPEAK	Ching Thong Choo	Dec 31, 2023
GSE220053	Identifying differential binding of transcription factor CLAMP on chromatin in S2 (male) and Kc (female) emmbryonic cell lines	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	7	NARROWPEAK	Erica Larschan	Dec 31, 2023
GSE224963	Chromatin state transitions in the Drosophila intestinal lineage reveal principles of cell type specification [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	6	NARROWPEAK	Allison Bardin	Oct 26, 2023
GSE224967	Chromatin state transitions in the Drosophila intestinal lineage reveal principles of cell type specification	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	63	BEDGRAPH GFF NARROWPEAK	Allison Bardin	Oct 26, 2023
GSE244555	The SWI/SNF nucleosome remodeler constrains enhancer activity during Drosophila wing development [FAIRE-seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	4	BW NARROWPEAK	Matthew Niederhuber	Oct 03, 2023
GSE244556	The SWI/SNF nucleosome remodeler constrains enhancer activity during Drosophila wing development	Other Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	10	BW NARROWPEAK	Matthew Niederhuber	Oct 03, 2023
GSE225889	Unistrand piRNA clusters are an evolutionarily conserved mechanism to suppress endogenous retroviruses across the Drosophila genus	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila ananassae Drosophila azteca Drosophila biarmipes Drosophila erecta Drosophila ficusphila Drosophila melanogaster Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila simulans Drosophila subobscura Drosophila suzukii Drosophila takahashii Drosophila virilis Drosophila yakuba	118	BW NARROWPEAK	Susanne Bornelöv	Sep 26, 2023
GSE240910	Unistrand piRNA clusters are an evolutionarily conserved mechanism to suppress endogenous retroviruses across the Drosophila genus [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila biarmipes Drosophila erecta Drosophila ficusphila Drosophila melanogaster Drosophila persimilis Drosophila pseudoobscura Drosophila simulans Drosophila suzukii Drosophila yakuba	18	BW NARROWPEAK	Susanne Bornelöv	Sep 26, 2023
GSE182204	Acetyl-methyllysine marks chromatin at active transcription start sites	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens	68	BIGWIG CSV NARROWPEAK TDF SRA Run Selector	Matthew Simon	Jul 21, 2023
GSE218019	Localization of the pioneer factor GAF to subnuclear foci is driven by DNA binding and required to silence satellite repeat expression [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	20	BW NARROWPEAK	Melissa M Harrison	Jun 27, 2023
GSE218253	Low-level repressive histone marks fine-tune stemness gene transcription in neural stem cells [CUT&Tag]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	27	BW NARROWPEAK TSV	Arjun Rajan	Jun 23, 2023