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137 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus		SRA Run Selector
GSE116397	Genome-wide analysis of AR binding and transcriptomic analysis of mesenchymal subsets during prostate development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	214	BW TXT SRA Run Selector	Claire Elizabeth Nash	Jun 30, 2019
GSE163620	The conservation and divergence of epigenitic reprogramming during mammalian early development	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Bos taurus Mus musculus Rattus norvegicus Sus scrofa	188	BW TXT SRA Run Selector	Wei Xie	Nov 26, 2021
GSE152678	Glyphosate Induced Transgenerational DNA Methylation and Histone Retention Sperm Epigenetic Biomarkers for Disease	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Rattus norvegicus	135	CSV SRA Run Selector	Michael K Skinner	Sep 12, 2020
GSE164361	Comparative Chromatin Dynamics and Expression Profiles of Neural Progenitor and Definitive Endoderm Lineage Differentiation in Two Mammalian Species	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	118	BED TXT SRA Run Selector	Seyed Ali Mortazavi	Feb 12, 2021
GSE87525	Assessment of Histone Tail Modifications and Transcriptional Profiling During Colon Cancer and Role of fish oil/pectin Diet Against Colon Carcinogen	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	107	XLS SRA Run Selector	Jennifer Goldsby	Sep 08, 2017
GSE126556	CREB mediates transient and sustained genomic responses to cAMP via distinct mechanisms [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	107	TXT XLSX SRA Run Selector	Sam Van de Velde	Jun 16, 2019
GSE106495	Glutamine 5 serotonylation on histone H3 is a permissive modification that functions combinatorialy with H3K4me3 to potentiate TFIID interactions	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus	87	TXT SRA Run Selector	Aarthi Ramakrishnan	Dec 18, 2018
GSE173723	Impaired GR expression in liver disrupts feeding induced gene expression, glucose uptake and glycogen storage	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	79	BEDGRAPH TXT SRA Run Selector	Lars Grøntved	Sep 08, 2021
GSE165655	Histone modification profile in animal models of neurodevelopmental disorders treated with TAK-418	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	74	TXT SRA Run Selector	Satoru Matsuda	Jan 29, 2021
GSE156530	Epigenome-Wide Association Study for Atrazine Induced Transgenerational Histone Retention Sperm Epigenetic Biomarkers for Disease	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	67	CSV SRA Run Selector	Michael K Skinner	Nov 19, 2020
GSE147992	Genome-wide maps of chromatin state in rat IUGR islets at 2 time points	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	61	CSV SRA Run Selector	Paul Zhiping Wang	Jul 15, 2020
GSE134799	ChIP assay in adult ventricular cardiomyocytes	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	60	BIGWIG SRA Run Selector	Yuliang Tan	Dec 09, 2020
GSE66653	Methylation of H3K9 by G9a/GLP protects against pathological cardiac hypertrophy	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	59	TXT SRA Run Selector	Felix Krueger	Dec 05, 2016
GSE106951	High-throughput sequencing and analysis of gene modification regulated by epigenetics modification in adult and old intracerebral hemorrhage rats. [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	56	TXT SRA Run Selector	dong chen	Nov 30, 2020
GSE81628	Integrative genomics outlines a biphasic glucose response and a ChREBP-RORγ axis regulating proliferation in β-cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	54	BEDGRAPH TXT SRA Run Selector	Susanne Mandrup	Sep 06, 2016
GSE116831	Deletion of Cdkn1b in ACI rats perturbs mammary progenitor cell proliferation and differentiation through non-cell-autonomous mechanisms	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	52	NARROWPEAK TSV SRA Run Selector	Kornelia Polyak	Feb 11, 2019
GSE130409	Genome wide anaylsis of histone modifications in rats exposed to endocrine disruptors. [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	48	TDF WIG SRA Run Selector	Cheryl L Walker	Mar 11, 2020
GSE137963	Developmental Origins of Transgenerational Sperm Histone Retention Following Ancestral Exposures	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	45	CSV SRA Run Selector	Michael K Skinner	Dec 31, 2019
GSE53862	Chromatin occupancy and target genes of TCF7L2 in hepatocytes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	44	DIFF GTF SRA Run Selector	Sami Heikkinen	Nov 24, 2014
GSE78688	Activity-dependent transcriptional changes in human neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus	43	BW SRA Run Selector	Bulent Ataman	Nov 02, 2016