GEO Browser - GEO

Series

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26 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Monodelphis domestica		SRA Run Selector
GSE30352	The evolution of gene expression levels in mammalian organs	Expression profiling by high throughput sequencing	Gallus gallus Gorilla gorilla Homo sapiens Macaca mulatta Monodelphis domestica Mus musculus Ornithorhynchus anatinus Pan paniscus Pan troglodytes Pongo pygmaeus	131	SRA Run Selector	Henrik Kaessmann	Oct 13, 2011
GSE68507	Cross-species comparison of epigenetic poising in the mammalian germ line	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Bos taurus Gallus gallus Homo sapiens Macaca mulatta Monodelphis domestica Mus musculus	87	TXT SRA Run Selector	Bluma J Lesch	May 07, 2016
GSE162152	Identification and evolutionary comparison of circular RNAs in five mammalian species and three organs.	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Monodelphis domestica Mus musculus Rattus norvegicus	84	GTF TXT SRA Run Selector	Franziska Gruhl	Sep 21, 2021
GSE102062	Sex-biased miRNA expression in mouse, opossum and chicken	Non-coding RNA profiling by high throughput sequencing	Gallus gallus Monodelphis domestica Mus musculus	76	BED TXT SRA Run Selector	Maria Warnefors	Nov 01, 2017
GSE71390	The relationship between gene network structure and expression variation among individuals and species	Expression profiling by high throughput sequencing	Carollia perspicillata Monodelphis domestica Mus musculus Sus scrofa	73	FASTA FPKM_TRACKING TXT SRA Run Selector	Marcelo Rivas	Aug 24, 2015
GSE22078	[E-TABM-722] Transcription factor binding evolution in five vertebrates	Genome binding/occupancy profiling by high throughput sequencing	Canis lupus familiaris Gallus gallus Homo sapiens Monodelphis domestica Mus musculus	61	SRA Run Selector	European Bioinformatics Institute	Jun 02, 2010
GSE43520	The evolution of lncRNA repertoires and expression patterns in tetrapods	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Gallus gallus Gorilla gorilla Homo sapiens Macaca mulatta Monodelphis domestica Mus musculus Ornithorhynchus anatinus Xenopus tropicalis	55	BEDGRAPH TXT SRA Run Selector	Anamaria Necsulea	Jan 19, 2014
GSE40499	Evolution of mammalian miRNA genes	Non-coding RNA profiling by high throughput sequencing	Didelphis virginiana Gallus gallus Homo sapiens Macaca mulatta Monodelphis domestica Mus musculus Ornithorhynchus anatinus	38	TXT SRA Run Selector	Henrik Kaessmann	Oct 01, 2012
GSE85815	Evolution of Gene Expression in the Uterine Cervix related to Steroid Signaling: Conserved features in the regulation of cervical remodeling.	Expression profiling by high throughput sequencing	Dasypus novemcinctus Monodelphis domestica Mus musculus Oryctolagus cuniculus	35	CSV SRA Run Selector	Gunter Wagner	Jul 31, 2017
GSE106077	A quantitative model for characterizing the evolutionary history of mammalian gene expression	Expression profiling by high throughput sequencing	Canis lupus familiaris Dasypus novemcinctus Monodelphis domestica Mustela putorius furo Oryctolagus cuniculus	33	TXT SRA Run Selector	Jenny Chen	Oct 21, 2018
GSE63330	DNA methylation in mammalian placentas	Methylation profiling by high throughput sequencing	Bos taurus Canis lupus familiaris Equus caballus Homo sapiens Macaca mulatta Monodelphis domestica Mus musculus Saimiri boliviensis	20	TAR SRA Run Selector	Janine LaSalle	Aug 05, 2015
GSE155315	Temporal- and Orbital Shear Stress-Dependent Changes in Opossum Kidney (OK) Cell Transcription	Expression profiling by high throughput sequencing	Monodelphis domestica	18	XLSX SRA Run Selector	Amanda Catherine Poholek	Sep 29, 2020
GSE45211	Chromosome-wide profiling of X-inactivation status and epigenetic regulation in opossum fetal brain and placenta	Expression profiling by high throughput sequencing	Monodelphis domestica	16	TXT SRA Run Selector	Andrew Clark	Sep 23, 2013
GSE109309	The mammalian decidual cell evolved from a cellular stress response	Expression profiling by high throughput sequencing	Monodelphis domestica	15	TXT SRA Run Selector	Cong Liang	Jun 21, 2018
GSE67659	Comparative transcriptomics of endometrial stromal fibroblasts	Expression profiling by high throughput sequencing	Bos taurus Homo sapiens Monodelphis domestica Neogale vison Oryctolagus cuniculus Rattus norvegicus	12	SRA Run Selector	Koryu Kin	Aug 01, 2016
GSE141609	Evolution of CpH methylation in vertebrate brains	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Apis mellifera Branchiostoma lanceolatum Callorhinchus milii Danio rerio Gallus gallus Lethenteron camtschaticum Monodelphis domestica Octopus bimaculoides Ornithorhynchus anatinus	11	CGMAP TSV SRA Run Selector	Ryan Lister	Oct 26, 2020
GSE94390	A new developmental mechanism for the separation of the mammalian middle ear ossicles from the jaw	Expression profiling by high throughput sequencing	Monodelphis domestica	9	XLS SRA Run Selector	Daniel J Urban	Feb 08, 2017
GSE45186	Chromosome-wide profiling of X-inactivation status and epigenetic regulation in fetal brain	Genome binding/occupancy profiling by high throughput sequencing	Monodelphis domestica	8	BED SRA Run Selector	Kory Douglas	Sep 23, 2013
GSE79121	Expression Profiling of Term Placenta in Viviparous Mammals by RNA-Seq	Expression profiling by high throughput sequencing	Ateles fusciceps Bos taurus Canis lupus familiaris Dasypus novemcinctus Loxodonta africana Monodelphis domestica Mus musculus Pan paniscus	8	FASTA FPKM_TRACKING SRA Run Selector	Don Leigh Armstrong	May 12, 2017
GSE54805	Age-dependent gene and protein expression following transection of neonatal spinal cord of Monodelphis domestica (South American Grey Short-tailed opossum)	Expression profiling by high throughput sequencing	Monodelphis domestica	7	TXT SRA Run Selector	Norman Saunders	Feb 10, 2015