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200 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome variation profiling by high throughput sequencing			SRA Run Selector
GSE181579	IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression [human sWGS]	Genome variation profiling by high throughput sequencing	Homo sapiens	101	CSV SRA Run Selector	Danny Misiak	May 31, 2023
GSE181581	IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression [mouse sWGS]	Genome variation profiling by high throughput sequencing	Mus musculus	24	CSV SRA Run Selector	Danny Misiak	May 31, 2023
GSE149472	LINE-1 retrotransposition impacts the genome of human pre-implantation embryos and extraembryonic tissues [hEMB]	Genome variation profiling by high throughput sequencing	Homo sapiens	8	XLSX SRA Run Selector	Martin Munoz-Lopez	Mar 31, 2023
GSE149473	LINE-1 retrotransposition impacts the genome of human pre-implantation embryos and extraembryonic tissues [placenta]	Genome variation profiling by high throughput sequencing	Homo sapiens	32	XLSX SRA Run Selector	Martin Munoz-Lopez	Mar 31, 2023
GSE149474	LINE-1 retrotransposition impacts the genome of human pre-implantation embryos and extraembryonic tissues [somatic tissues]	Genome variation profiling by high throughput sequencing	Homo sapiens	4	XLSX SRA Run Selector	Martin Munoz-Lopez	Mar 31, 2023
GSE149475	LINE-1 retrotransposition impacts the genome of human pre-implantation embryos and extraembryonic tissues [trios]	Genome variation profiling by high throughput sequencing	Homo sapiens	6	XLSX SRA Run Selector	Martin Munoz-Lopez	Mar 31, 2023
GSE149476	LINE-1 retrotransposition impacts the genome of human pre-implantation embryos and extraembryonic tissues [twins]	Genome variation profiling by high throughput sequencing	Homo sapiens	8	XLSX SRA Run Selector	Martin Munoz-Lopez	Mar 31, 2023
GSE165330	Amniotes co-opt intrinsic genetic instability to protect germ-line genome integrity	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Other	Gallus gallus	123	BIGWIG CSV SF TXT SRA Run Selector	Jiafei Shen	Jan 24, 2023
GSE157083	Memory-induced epigenome in Huntington's disease (HD) mice [ChIP-seq]	Genome variation profiling by high throughput sequencing	Mus musculus	28	WIG SRA Run Selector	Charles DECRAENE	Oct 06, 2022
GSE136892	Mitochondrial DNA atlas reveals physiopathology of type 2 diabetes	Genome variation profiling by high throughput sequencing	Homo sapiens	40	TXT SRA Run Selector	Yueying Xiang	Aug 30, 2022
GSE110009	Single cell transcriptome landscape of primary and metastatic tumor in colon cancer	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens	76	TXT SRA Run Selector	Rui WANG	Jul 30, 2022
GSE165136	SNP effect on chromatin accessibility (Whole genome sequencing)	Genome variation profiling by high throughput sequencing	Mus musculus	3	VCF SRA Run Selector	Yongbing Zhao	Jul 21, 2022
GSE171127	Comparative parallel meta-analysis of cells undergoing reprogramming to pluripotency and trophectoderm states	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	184	BETA BIGWIG MTX TSV TXT SRA Run Selector	Tommy Kaplan	Apr 28, 2022
GSE184912	Multi-omics approaches for comprehensive analysis and understanding to immune response in miniature pig breed	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Sus scrofa	16	TXT VCF SRA Run Selector	Devender Arora	Feb 06, 2022
GSE160659	Next Generation Sequencing Analysis of Mice Glioma Exomes	Genome variation profiling by high throughput sequencing	Mus musculus	6	TXT SRA Run Selector	Chong Liu	Jan 11, 2022
GSE182303	The impact of long-term physical inactivity on adipose tissue immunometabolism	Genome variation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	40	TXT SRA Run Selector	William V Trim	Jan 01, 2022
GSE185495	Comprehensive evaluation of adenine base editors induced mutations at genomic and transcriptional level [WGS]	Other Genome variation profiling by high throughput sequencing	Oryza sativa	71	VCF SRA Run Selector	shaofang Li	Jan 01, 2022
GSE145921	Genomic and transcriptomic analysis of medulloblastoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	33	BED BW CSV TXT SRA Run Selector	Zaili Luo	Dec 31, 2021
GSE184700	Validation of dedifferentiated liposarcoma (DDLS) cell lines with the original tumors via copy number alteration analysis [sequencing]	Genome variation profiling by high throughput sequencing	Homo sapiens	3	TXT SRA Run Selector	Bic MSKCC	Dec 31, 2021
GSE161335	Translesion DNA synthesis-driven mutagenesis in very early embryogenesis of fast cleaving embryos	Genome variation profiling by high throughput sequencing	Drosophila melanogaster	4	CSV JSON VCF SRA Run Selector	Domenico Maiorano	Dec 28, 2021