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7376 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Mus musculus		TSV
GSE94418	Transcriptional regulation of tDNA in H9 ESCs	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	13	CSV TSV TXT SRA Run Selector	keith e giles	Feb 02, 2020
GSE111902	Compendium of CD8+ T cell Data	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	67	BROADPEAK BW NARROWPEAK TSV TXT SRA Run Selector	Robert Anthony Amezquita	Mar 17, 2018
GSE128818	Aberrant phase separation of transcription factors in human developmental disorders	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Gallus gallus Mus musculus	19	BED BW MTX TSV SRA Run Selector	Denes Hnisz	May 07, 2020
GSE156665	Pancreatic Ppy-expressing gamma-cells display mixed phenotypic traits and adaptive plasticity to engage insulin production	Third-party reanalysis Expression profiling by high throughput sequencing	Mus musculus	12	MTX TSV SRA Run Selector	Marta Perez Frances	Jun 04, 2021
GSE162664	MOCCASIN: A method for correcting for known and unknown confounders in RNA splicing analysis	Third-party reanalysis Expression profiling by high throughput sequencing	Mus musculus		TSV TXT	PAUL JEWELL	Dec 06, 2020
GSE166775	Single-Cell RNA Sequencing Reveals the Immunological Profiles of Renal Allograft Rejection in mice	Third-party reanalysis Expression profiling by high throughput sequencing	Mus musculus	1	MTX TSV TXT SRA Run Selector	QIXIA SHEN	Jul 21, 2021
GSE197610	The RNA Binding Protein Dead End1 Is Differentially Expressed in Male Germ Cells During Late Gestation and Targets Chromatin Modifiers and Translational Machinery	Third-party reanalysis Other Expression profiling by high throughput sequencing	Mus musculus	34	CLOUPE CSV MTX RDATA SF TSV TXT XLSX	Victor A Ruthig	Oct 18, 2022
GSE205285	Mouse single positive thymocyte bulk RNA-seq from Kmt2d knockout and control littermates.	Third-party reanalysis Expression profiling by high throughput sequencing	Mus musculus	18	BIGWIG TSV TXT	Sarah J Potter	May 03, 2024
GSE241233	RNA-seq analysis of bulk Human and single-cell Musashi2-CreER-MycT58A; R26-LSL-tdTomato Mouse Pancreas ASCP, PDAC, and ACC Tumors	Third-party reanalysis Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	10	H5 JSON MTX TSV	Nirakar Rajbhandari	Aug 21, 2023
GSE242090	Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups	Third-party reanalysis Methylation profiling by genome tiling array Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	69	IDAT MTX TAB TSV	Mamy Jean de Dieu ANDRIANTERANAGNA	Sep 20, 2023
GSE248775	COVID-19 and influenza infections mediate distinct pulmonary cellular and transcriptomic changes [scRNA-Seq]	Third-party reanalysis Expression profiling by high throughput sequencing	Mus musculus	3	MTX TSV	Jay Kolls	Dec 02, 2023
GSE248778	COVID-19 and influenza infections mediate distinct pulmonary cellular and transcriptomic changes	Third-party reanalysis Expression profiling by high throughput sequencing	Mus musculus	24	MTX TSV	Jay Kolls	Dec 02, 2023
GSE270317	Serine metabolism leverages the integrated stress response to direct stem cell fate during tissue regeneration [scRNA-seq]	Third-party reanalysis Expression profiling by high throughput sequencing	Mus musculus	2	CSV MTX RDS TSV	Jesse Stephen Swyer Novak	Jun 20, 2024
GSE51334	DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions	Other	Homo sapiens Mus musculus	993	BAM BED BIGWIG BROADPEAK NARROWPEAK PAIR TSV TXT	ENCODE DCC	Nov 20, 2014
GSE71831	Deletion of DXZ4 on the human inactive X chromosome eliminates superdomains and impairs gene silencing	Other Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus	101	HIC PDF TSV TXT SRA Run Selector	Miriam Huntley	Jul 19, 2016
GSE80280	3D structures of individual mammalian genomes reveal principles of nuclear organization	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	42	BED HDF5 PDB TSV TXT XYZ SRA Run Selector	Andre J Faure	Mar 07, 2017
GSE84039	Development of live-attenuated lymphocytic choriomeningitis virus vectors for potent alarmin-driven CD8+ T cell induction in tumor immunotherapy	Other	Mus musculus	8	TSV	DBM Bioinformatics Core Facility	Mar 08, 2017
GSE84236	Epigenetic restriction of embryonic and extraembryonic lineages mirrors the somatic transition to cancer	Other Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	200	BED BW TSV	Jiantao Shi	Sep 18, 2017
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Other Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE88987	Dynamic changes in chromatin accessibility in CD8+ T cells responding to viral infection	Other Expression profiling by high throughput sequencing	Mus musculus	44	TSV SRA Run Selector	James Scott-Browne	Dec 13, 2016