Accession | Title | Series type(s) | Organism(s) | Samples | GDS | Supplementary | Contact | Release date |
---|---|---|---|---|---|---|---|---|
Filter | Escherichia coli str. K-12 substr. MG1655 | TXT | ||||||
GSE200448 |
Deep sequencing and fitness calculation for plasmids carrying the CREATE cassette from the enriched tolerant strains under different pressures by using Illumina protocol
|
5 | Yangyang Zheng | Apr 01, 2024 | ||||
GSE239503 |
Bacterial single cell RNA-seq unveils cyclic-di-GMP as an antitoxin critical for antibiotic tolerance in biofilm [RNA-seq]
|
1 |
|
Xiaodan Yan | Feb 20, 2024 | |||
GSE239504 |
Bacterial single cell RNA-seq unveils cyclic-di-GMP as an antitoxin critical for antibiotic tolerance in biofilm [scRNA-seq]
|
|
14 |
|
Xiaodan Yan | Feb 20, 2024 | ||
GSE239505 |
Bacterial single cell RNA-seq unveils cyclic-di-GMP as an antitoxin critical for antibiotic tolerance in biofilm.
|
|
21 |
|
Xiaodan Yan | Feb 20, 2024 | ||
GSE214511 |
The environmentally-regulated interplay between three-dimensional chromatin organisation and transcription of the Escherichia coli proVWX operon
|
11 | Remus Dame | Sep 25, 2023 | ||||
GSE233607 |
In vivo-like nearest neighbor parameters accurately predict fractional RNA base-pairing in cells
|
9 |
|
Elizabeth Jolley | Sep 14, 2023 | |||
GSE155243 |
Anatomy of footprint extension in ribosome profiling reveals translational landscape mediated by S1 protein in bacteria
|
25 |
|
tomoya fujita | Jul 28, 2023 | |||
GSE211579 |
Sodium fluoride exposure leads to ATP depletion and altered RNA decay in Escherichia coli under anaerobic conditions
|
|
18 |
|
Sue Lin-Chao | Mar 10, 2023 | ||
GSE192799 |
Construction of an artificial diploid Escherichia coli using a CRISPR-based chromosome-doubling technique
|
6 | Pengju Wang | Dec 29, 2022 | ||||
GSE195954 |
A Systems Biology Approach To Disentangle the Direct and Indirect Effects of Global Transcription Factors on Gene Expression in Escherichia coli
|
8 | Ankita Pal | Nov 30, 2022 | ||||
GSE199153 |
Characterization of an Entner-Doudoroff pathway-activated Escherichia coli
|
4 | Donghyuk Kim | Nov 16, 2022 | ||||
GSE165008 |
Transcriptome profile of Escherichia coli K12 MG1655 cells lacking selected genes
|
8 |
|
Ioly Kotta-Loizou | Nov 02, 2022 | |||
GSE165009 |
Transcriptome profile of Escherichia coli K12 MG1655 Hpx- cells
|
16 |
|
Ioly Kotta-Loizou | Nov 02, 2022 | |||
GSE165118 |
Transcriptome profile of Escherichia coli K12 MG1655 under Rtc-inducing conditions
|
24 | Ioly Kotta-Loizou | Nov 02, 2022 | ||||
GSE202549 |
RNA-Seq of delta-cyaA E.coli mutant at 10 different cAMP concentration
|
22 | Shweta Chakraborty | Nov 02, 2022 | ||||
GSE213721 |
Genes regulated by Hfq
|
8 | Chaitanya Jain | Sep 22, 2022 | ||||
GSE179691 |
Ribosome collisions in bacteria promote ribosome rescue by triggering mRNA cleavage by SmrB
|
4 |
|
Allen R Buskirk | Aug 01, 2022 | |||
GSE206196 |
Transcriptomic analysis of homoserine-evolved MG1655 strain (wild type) and of homoserine -treated wild type, mutant deleted for thrL and mutant bearing thrL* allele
|
|
24 |
|
JEAN MARIE FRANCOIS | Jun 18, 2022 | ||
GSE171970 |
Pervasive transcription-coupled DNA repair in E. coli [RNA-seq 1]
|
8 |
|
Evgeny Nudler | Feb 05, 2022 | |||
GSE171971 |
Pervasive transcription-coupled DNA repair in E. coli [RNA-seq 2]
|
3 |
|
Evgeny Nudler | Feb 05, 2022 |