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12 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Other	Arabidopsis thaliana			WIG
GSE39051	Integrative genome-wide analysis reveals HLP1, a novel RNA-binding protein， regulates plant flowering by targeted alternative polyadenylation	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	8		BED WIG SRA Run Selector	xiaofeng cao	Jun 30, 2015
GSE42695	Genome-wide profiling of long non-coding RNAs in Arabidopsis	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	12		TXT WIG SRA Run Selector	Yijun Qi	Nov 28, 2015
GSE50242	MNase-seq analysis of Col-0 and chr11-1 chr17-1	Other	Arabidopsis thaliana	2		WIG SRA Run Selector	yijing zhang	Mar 30, 2014
GSE61439	Pol-IV dependent transcripts in Arabidopsis	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	42		PDF TXT WIG XLSX SRA Run Selector	Steve Jacobsen	Sep 13, 2015
GSE69904	Arginine methylation regulates widespread alternative polyadenylation	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	11		BED WIG SRA Run Selector	xiaofeng cao	Jan 01, 2019
GSE89346	BAF60 binding sites and their role in Modulating DNA accessibility in Arabidopsis thaliana	Genome binding/occupancy profiling by high throughput sequencing Other	Arabidopsis thaliana	9		WIG	Alaguraj Veluchamy	Apr 25, 2017
GSE109668	DNA replication origins in whole Arabidopsis seedlings	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	22		WIG SRA Run Selector	Crisanto Gutierrez	Apr 15, 2018
GSE127002	The RNA NAD+ cap is widespread in the Arabidopsis transcriptome and probably promotes translation	Other	Arabidopsis thaliana	28		WIG SRA Run Selector	shaofang Li	Jun 03, 2019
GSE128698	Immediate transcriptional responses to heat shock of plant leaf	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	16		BEDGRAPH WIG SRA Run Selector	Zhicheng Dong	Jul 11, 2020
GSE166897	The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Arabidopsis thaliana blank sample	241		BW FPKM_TRACKING TXT WIG	magdalena ewelina potok	Nov 23, 2021
GSE169497	DNA methylation-free Arabidopsis reveals crucial roles of DNA methylation in regulating gene expression and plant development	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	30		BW TXT WIG SRA Run Selector	Li He	Jan 16, 2022
GSE188493	Histone chaperone ASF1 mediates H3.3-H4 deposition in Arabidopsis	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	101		BW NARROWPEAK RESULTS TXT WIG SRA Run Selector	Zhenhui Zhong	Oct 27, 2022