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109 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Mesocricetus auratus
GSE271482	Andrographis paniculata standardized extract attenuates transcriptome, proteome, and metabolome changes caused by SARS-CoV-2 infection in golden hamster kidney	Expression profiling by high throughput sequencing	Mesocricetus auratus	15	TXT	Arnatchai Maiuthed	Jul 09, 2024
GSE217397	RNA sequencing of BHK-21 cells carrying alphaviral RNA replication system	Expression profiling by high throughput sequencing	Mesocricetus auratus	6	TXT	Yihan Lin	Jul 07, 2024
GSE235327	Analyzing the process of mutation accumulation in KRAS evolution experiment using amplicon sequencing	Other	Mesocricetus auratus	8	XLSX	Yihan Lin	Jul 07, 2024
GSE235328	Analyzing the process of mutation accumulation in MEK1 evolution experiment using amplicon sequencing	Other	Mesocricetus auratus	2	XLSX	Yihan Lin	Jul 07, 2024
GSE235338	Analysis of the accumulation of mutations in self-replicating RNAs using barcoded EGFP library	Other	Mesocricetus auratus	5	FA XLSX	Yihan Lin	Jul 07, 2024
GSE235339	Measurement of the degradation rate of alphaviral RNA in BHK-21 cells	Expression profiling by high throughput sequencing	Mesocricetus auratus	6	TXT	Yihan Lin	Jul 07, 2024
GSE235341	Single cell RNA-seq of BHK-21 cells carrying alphaviral RNA replication system	Expression profiling by high throughput sequencing	Mesocricetus auratus	1	FA GTF MTX TSV	Yihan Lin	Jul 07, 2024
GSE235343	Replicative RNA enables directed evolution and Darwinian adaptation in mammalian cells	Other Expression profiling by high throughput sequencing	Mesocricetus auratus	28	FA GTF MTX TSV TXT XLSX	Yihan Lin	Jul 07, 2024
GSE231910	Respiratory SARS-CoV-2 Infection Induces Skeletal Muscle Atrophy and Long-Lasting Energy Metabolism Suppression	Expression profiling by high throughput sequencing	Mesocricetus auratus	21	TXT	Boston University Microarray and Sequencing Resource	Jun 28, 2024
GSE239893	RNA-Seq data from hamster lung hila and peripheries infected with BANAL-20-236, WK-521, and WK-521 dFCS	Expression profiling by high throughput sequencing	Mesocricetus auratus	56	TXT	Kei Sato	May 20, 2024
GSE201423	RNA-sequencing identifies the activation of IFN-dependent and IFN-independent pathways in the lungs of hamsters treated with NanoSTING	Expression profiling by high throughput sequencing	Mesocricetus auratus	8	TXT	Navin Varadarajan	May 13, 2024
GSE200470	Divergent composition and transposon-silencing activity of small RNAs in mammalian oocytes	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Canis lupus familiaris Capra hircus Cavia porcellus Cricetulus griseus Danio rerio Homo sapiens Macaca fascicularis Mesocricetus auratus Mus musculus Oryctolagus cuniculus Rattus norvegicus Sus scrofa domesticus	138		Wei Liu	Mar 06, 2024
GSE227846	The protective role of the HSP90 inhibitor, STA-9090, in lungs of SARS-CoV-2-infected Syrian golden hamsters	Expression profiling by high throughput sequencing	Homo sapiens Mesocricetus auratus	56	TXT	Luiz Gustavo Teixeira Alves	Feb 29, 2024
GSE254516	Prior influenza infection mitigates SARS-CoV-2 disease in Syrian hamsters	Expression profiling by high throughput sequencing	Mesocricetus auratus	22	TXT	Antariksh Tyagi	Feb 05, 2024
GSE249987	Inhalation of ACE2-expressing lung spheroid cell exosomes provides prophylactic protection against SARS-CoV-2	Expression profiling by high throughput sequencing	Mesocricetus auratus	8	XLSX	Zhenzhen Wang	Jan 13, 2024
GSE246866	Breakthrough infections by SARS-CoV-2 variants boost cross-reactive hybrid immune responses in mRNA-vaccinated Golden Syrian Hamsters	Expression profiling by high throughput sequencing	Mesocricetus auratus	60	TXT	Max Chang	Dec 18, 2023
GSE223748	Mammalian Methylation Consortium	Methylation profiling by array	Acinonyx jubatus Acomys cahirinus Addax nasomaculatus Aepyceros melampus Alexandromys mongolicus Alexandromys oeconomus Alticola barakshin Alticola semicanus Amblysomus hottentotus Antidorcas marsupialis Antrozous pallidus Aonyx cinereus Aplodontia rufa Apodemus agrarius Apodemus peninsulae Apodemus sylvaticus Apodemus uralensis Artibeus jamaicensis Arvicanthis niloticus Asellia tridens Atelerix albiventris Balaena mysticetus Balaenoptera borealis Balaenoptera musculus Bathyergus janetta Bathyergus suillus Blarina brevicauda Bos taurus Bradypus variegatus Cabassous unicinctus Caenolestes fuliginosus Callithrix geoffroyi Callithrix jacchus Callospermophilus lateralis Callospermophilus saturatus Canis latrans Canis lupus familiaris Capra hircus Capreolus capreolus Carollia perspicillata Castor canadensis Cavia aperea Cavia porcellus Cavia tschudii Cephalorhynchus commersonii Cephalorhynchus hectori hectori Cephalorhynchus hectori maui Ceratotherium simum simum Cervus canadensis Cervus elaphus Chaetophractus villosus Cheirogaleus medius Chinchilla lanigera Chlorocebus sabaeus Choloepus didactylus Choloepus hoffmanni Chrysocyon brachyurus Clethrionomys gapperi Condylura cristata Connochaetes taurinus albojubatus Cricetomys gambianus Cricetulus barabensis Cricetulus griseus Cricetulus longicaudatus Crocidura cyanea Crocuta crocuta Cryptomys hottentotus Ctenomys lewisi Ctenomys opimus Ctenomys steinbachi Cuniculus paca Cyclopes didactylus Cynopterus brachyotis Dasypus novemcinctus Daubentonia madagascariensis Delphinapterus leucas Delphinus delphis Dendrohyrax arboreus Desmodus rotundus Diceros bicornis Didelphis marsupialis Didelphis virginiana Dipus sagitta Dromiciops gliroides Echinops telfairi Eidolon helvum Elephantulus edwardii Elephantulus myurus Elephas maximus Ellobius talpinus Enhydra lutris Eozapus setchuanus Eptesicus fuscus Equus asinus somalicus Equus caballus Equus grevyi Equus quagga Erethizon dorsatum Erinaceus europaeus Eudorcas thomsonii Eulemur albifrons Eulemur coronatus Eulemur flavifrons Eulemur fulvus Eulemur fulvus collaris Eulemur macaco Eulemur mongoz Eulemur rubriventer Eulemur rufus Eulemur sanfordi Eumetopias jubatus Felis catus Fukomys damarensis Galago moholi Galea musteloides Galea musteloides leucoblephara Galeopterus variegatus Gazella leptoceros Georychus capensis Gerbillus cheesmani Gerbillus nanus Giraffa camelopardalis Glaucomys sabrinus Globicephala macrorhynchus Gorilla gorilla Hapalemur griseus Hemicentetes semispinosus Hemiechinus auritus Heterocephalus glaber Hipposideros ruber Hippotragus equinus Hippotragus niger Homo sapiens Hydrochoerus hydrochaeris Hylomys suillus Hystrix cristata Ictidomys tridecemlineatus Jaculus jaculus Kobus megaceros Lagenorhynchus albirostris Lagenorhynchus obliquidens Lasiopodomys brandtii Lasiopodomys gregalis Lasiopodomys mandarinus Lemur catta Leptonycteris yerbabuenae Lepus americanus Lepus californicus Litocranius walleri Loris tardigradus Loxodonta africana Lycaon pictus Lynx rufus Macaca mulatta Macropus fuliginosus Macropus giganteus Macroscelides proboscideus Marmota flaviventris Marmota monax Martes americana Megaptera novaeangliae Meriones libycus Meriones rex Meriones unguiculatus Mesocricetus auratus Mesoplodon bidens Micaelamys namaquensis Microcebus murinus Microgale cowani Microgale drouhardi Microgale thomasi Microtus fortis Microtus guentheri Microtus maximowiczii Microtus ochrogaster Microtus pennsylvanicus Microtus richardsoni Mirza zaza Molossus molossus Monodelphis domestica Mops pumilus Muntiacus vaginalis Mus minutoides Mus musculus Mustela altaica Mustela frenata Mustela putorius furo Myocastor coypus Myodes rufocanus Myotis brandtii Myotis evotis Myotis lucifugus Myotis myotis Myotis nattereri Myotis thysanodes Myotis vivesi Myotis yumanensis Nanger dama Nanger granti Nanger soemmerringii Nannospalax ehrenbergi Nannospalax galili Napaeozapus insignis Neogale vison Neomys fodiens Neophoca cinerea Neotoma cinerea Nesogale talazaci Neurotrichus gibbsii Notamacropus agilis Notamacropus eugenii Notamacropus rufogriseus Nothocricetulus migratorius Nyctalus noctula Nycticebus coucang Nycticeius humeralis Ochotona alpina Ochotona dauurica Ochotona hyperborea Ochotona pallasi Ochotona princeps Ochotona rufescens Odobenus rosmarus divergens Odocoileus virginianus Okapia johnstoni Ondatra zibethicus Orcinus orca Oreamnos americanus Orientallactaga sibirica Ornithorhynchus anatinus Orycteropus afer Oryctolagus cuniculus Osphranter robustus Osphranter rufus Otolemur crassicaudatus Ovis aries Pan troglodytes Panthera leo Panthera tigris Papio hamadryas Paraechinus aethiopicus Paraechinus hypomelas Parascalops breweri Perodicticus potto Peromyscus californicus Peromyscus eremicus Peromyscus leucopus Peromyscus maniculatus Peromyscus polionotus Phascolarctos cinereus Phoca groenlandica Phoca vitulina Phocoena phocoena Phodopus campbelli Phodopus roborovskii Phyllostomus discolor Phyllostomus hastatus Physeter catodon Pipistrellus pipistrellus Plecotus auritus Pongo pygmaeus Procavia capensis Propithecus coquereli Propithecus diadema Propithecus tattersalli Pteropus giganteus Pteropus hypomelanus Pteropus poliocephalus Pteropus pumilus Pteropus rodricensis Pteropus vampyrus Puma concolor Rattus norvegicus Rattus rattus Rhabdomys pumilio Rhinoceros unicornis Rhinolophus alcyone Rhinolophus ferrumequinum Rhinopoma hardwickii Rhombomys opimus Rhynchonycteris naso Rousettus aegyptiacus Saccopteryx bilineata Sarcophilus harrisii Scalopus aquaticus Scapanus orarius Sciurus carolinensis Sciurus niger Setifer setosus Smutsia temminckii Sorex caecutiens Sorex cinereus Sorex hoyi Sorex isodon Sorex minutissimus Sorex palustris Sorex roboratus Sorex trowbridgii Sorex tundrensis Sorex vagrans Steno bredanensis Suncus murinus Suncus varilla Suricata suricatta Sus scrofa Sus scrofa domesticus Sylvilagus audubonii Sylvilagus bachmani Sylvilagus brasiliensis Sylvilagus floridanus Sylvilagus nuttallii Tachyglossus aculeatus Tadarida brasiliensis Talpa occidentalis Tamandua mexicana Tamandua tetradactyla Tamias amoenus Tamias striatus Tamias townsendii Tamiasciurus douglasii Tamiasciurus hudsonicus Tenrec ecaudatus Tolypeutes matacus Trachypithecus francoisi Tragelaphus angasii Tragelaphus eurycerus Tragelaphus imberbis Tragelaphus oryx Tragelaphus spekii Tragelaphus strepsiceros Trichechus manatus Tupaia belangeri Tupaia gracilis Tupaia longipes Tupaia tana Tursiops aduncus Tursiops truncatus Urocitellus columbianus Ursus americanus Varecia rubra Varecia variegata Vicugna pacos Vombatus ursinus Vulpes vulpes Xanthonycticebus pygmaeus Zalophus californianus Zapus princeps	15043	CSV DOCX IDAT	Steve Horvath	Aug 05, 2023
GSE217621	The non-redundant functions of PIWI family proteins in gametogenesis in golden hamsters	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mesocricetus auratus Mus musculus	214	XLSX	Wen Xiao	Jul 13, 2023
GSE227411	Totum-070, a nutritional combination of plant extracts, prevents hypercholesterolemia in high fat diet-fed hamsters by inhibiting intestinal cholesterol absorption	Expression profiling by high throughput sequencing	Mesocricetus auratus	24	TXT	Cédric Langhi	Jun 30, 2023
GSE233642	In vivo inhibition of nuclear ACE2 translocation protects against SARS-CoV-2 replication and lung damage through epigenetic imprinting	Expression profiling by high throughput sequencing	Mesocricetus auratus unidentified	49	CSV DCC TXT	Quan Nguyen	Jun 01, 2023