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8 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter			Agathobacter rectalis ATCC 33656
GSE48532	Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome (GeneChip)	Expression profiling by array	Agathobacter rectalis ATCC 33656 Bacteroides caccae ATCC 43185 Bacteroides ovatus ATCC 8483 Bacteroides sp. WH2 Bacteroides thetaiotaomicron VPI-5482 Bacteroides uniformis ATCC 8492 Blautia obeum ATCC 29174 Collinsella aerofaciens ATCC 25986 Dorea longicatena DSM 13814 Faecalibacterium prausnitzii M21/2 Parabacteroides distasonis ATCC 8503 Phocaeicola vulgatus ATCC 8482 Thomasclavelia spiroformis DSM 1552 [Clostridium] scindens ATCC 35704 [Ruminococcus] torques ATCC 27756	168		CEL CHP	Nathan P McNulty	Aug 20, 2013
GSE48537	Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome	Expression profiling by high throughput sequencing Other Expression profiling by array	Agathobacter rectalis ATCC 33656 Bacteria Bacteroides caccae ATCC 43185 Bacteroides cellulosilyticus Bacteroides ovatus ATCC 8483 Bacteroides sp. WH2 Bacteroides thetaiotaomicron VPI-5482 Bacteroides uniformis ATCC 8492 Blautia obeum ATCC 29174 Collinsella aerofaciens ATCC 25986 Dorea longicatena DSM 13814 Faecalibacterium prausnitzii M21/2 Parabacteroides distasonis ATCC 8503 Phocaeicola vulgatus ATCC 8482 Thomasclavelia spiroformis DSM 1552 [Clostridium] scindens ATCC 35704 [Ruminococcus] torques ATCC 27756	895		CEL CHP TXT	Nathan P McNulty	Aug 20, 2013
GSE48807	The metabolic niche of a prominent sulfate-reducing human gut bacterium [2]	Other	Agathobacter rectalis ATCC 33656 Bacteroides caccae ATCC 43185 Bacteroides ovatus ATCC 8483 Bacteroides thetaiotaomicron VPI-5482 Collinsella aerofaciens ATCC 25986 Desulfovibrio piger GOR1 Escherichia coli str. K-12 substr. MG1655 Marvinbryantia formatexigens DSM 14469 [Clostridium] symbiosum	114		TXT SRA Run Selector	Federico E Rey	Jul 12, 2013
GSE48809	The metabolic niche of a prominent sulfate-reducing human gut bacterium	Expression profiling by high throughput sequencing Other	Agathobacter rectalis ATCC 33656 Bacteroides caccae ATCC 43185 Bacteroides ovatus ATCC 8483 Bacteroides thetaiotaomicron VPI-5482 Collinsella aerofaciens ATCC 25986 Desulfovibrio piger GOR1 Escherichia coli str. K-12 substr. MG1655 Marvinbryantia formatexigens DSM 14469 Mus musculus [Clostridium] symbiosum	135		TXT	Federico E Rey	Jul 12, 2013
GSE48409	The metabolic niche of a prominent sulfate-reducing human gut bacterium [1]	Expression profiling by high throughput sequencing	Agathobacter rectalis ATCC 33656 Bacteroides caccae ATCC 43185 Bacteroides ovatus ATCC 8483 Bacteroides thetaiotaomicron VPI-5482 Collinsella aerofaciens ATCC 25986 Desulfovibrio piger GOR1 Escherichia coli str. K-12 substr. MG1655 Marvinbryantia formatexigens DSM 14469 [Clostridium] symbiosum	13		TXT SRA Run Selector	Federico E Rey	Jun 29, 2013
GSE26687	Predicting a human gut microbiota's response to diet in gnotobiotic mice.	Expression profiling by high throughput sequencing Other	Agathobacter rectalis ATCC 33656 Bacteria Bacteroides caccae ATCC 43185 Bacteroides ovatus ATCC 8483 Bacteroides thetaiotaomicron VPI-5482 Blautia hydrogenotrophica DSM 10507 Collinsella aerofaciens ATCC 25986 Desulfovibrio piger GOR1 Escherichia coli str. K-12 substr. MG1655 Marvinbryantia formatexigens DSM 14469 [Clostridium] symbiosum	490		TXT SRA Run Selector	Jeremiah J Faith	May 20, 2011
GSE25575	Depolymerization of plant cell wall glycans by symbiotic human gut bacteria (Bacteroides ovatus)	Expression profiling by array	Agathobacter rectalis ATCC 33656 Bacteroides caccae ATCC 43185 Bacteroides ovatus Bacteroides ovatus ATCC 8483 Bacteroides sp. WH2 Bacteroides thetaiotaomicron VPI-5482 Bacteroides uniformis ATCC 8492 Blautia obeum ATCC 29174 Collinsella aerofaciens ATCC 25986 Dorea longicatena DSM 13814 Faecalibacterium prausnitzii M21/2 Parabacteroides distasonis ATCC 8503 Phocaeicola vulgatus ATCC 8482 Thomasclavelia spiroformis DSM 1552 [Clostridium] scindens ATCC 35704 [Ruminococcus] torques ATCC 27756	25		CEL	Eric Charles Martens	May 01, 2011
GSE25576	Depolymerization of plant cell wall glycans by symbiotic human gut bacteria	Expression profiling by array	Agathobacter rectalis Agathobacter rectalis ATCC 33656 Bacteroides caccae ATCC 43185 Bacteroides ovatus Bacteroides ovatus ATCC 8483 Bacteroides sp. WH2 Bacteroides thetaiotaomicron Bacteroides thetaiotaomicron VPI-5482 Bacteroides uniformis ATCC 8492 Blautia obeum ATCC 29174 Collinsella aerofaciens ATCC 25986 Dorea longicatena DSM 13814 Faecalibacterium prausnitzii M21/2 Lachnospira eligens Methanobrevibacter smithii Parabacteroides distasonis Parabacteroides distasonis ATCC 8503 Phocaeicola vulgatus Phocaeicola vulgatus ATCC 8482 Thomasclavelia spiroformis DSM 1552 [Clostridium] scindens ATCC 35704 [Ruminococcus] torques ATCC 27756	39		CEL	Eric Charles Martens	May 01, 2011