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1484 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Danio rerio
GSE14782	Mycobacterium marinum chronic infection of adult zebrafish	Expression profiling by array Expression profiling by high throughput sequencing	Danio rerio	8	XML SRA Run Selector	Anna Magdalena Zakrzewska	Jun 30, 2009
GSE20682	High-throughput SuperSAGE for digital gene expression analysis of multiple samples using Next Generation Sequencing	Expression profiling by high throughput sequencing	Arabidopsis thaliana Danio rerio Oryza sativa	31		Hideo Matsumura	Oct 01, 2010
GSE21024	Traf6 function in the innate immune response of zebrafish embryos	Expression profiling by high throughput sequencing	Danio rerio	4	SAM TXT SRA Run Selector	Oliver Stockhammer	Aug 01, 2010
GSE22068	Expanding the MicroRNA Targeting Code: A Novel Type of Site with Centered Pairing	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Danio rerio Homo sapiens	11	TXT SRA Run Selector	Jin-Wu Nam	Jun 25, 2010
GSE22472	Deep sequencing of the innate immune transcriptomic response of zebrafish embryos to Salmonella infection	Expression profiling by high throughput sequencing	Danio rerio	4	TXT SRA Run Selector	Oliver Stockhammer	Oct 26, 2010
GSE22830	High-throughput sequencing of mRNA from oocyte, 1 cell, 16/32 cells, 128/256 cells, 3.5hpf and 5.3hpf zebrafish embryos (Wild type; AB line)	Expression profiling by high throughput sequencing	Danio rerio	6	BEDGRAPH GFF SRA Run Selector	Justin Jeyakani Joseph Gnanakkan	Mar 31, 2011
GSE25023	[E-MTAB-308] Zebrafish gene 3 prime end pull down for genome annotation	Expression profiling by high throughput sequencing	Danio rerio	7	SRA Run Selector	European Bioinformatics Institute	Dec 04, 2010
GSE30603	[E-MTAB-434] Transcription profiling by high throughput sequencing of zebra fish tissues and developmental stages	Expression profiling by high throughput sequencing	Danio rerio	7	SRA Run Selector	European Bioinformatics Institute	Jul 14, 2011
GSE30608	[E-MTAB-460] Sanger_zebrafish_sequencing	Expression profiling by high throughput sequencing	Danio rerio	12	SRA Run Selector	European Bioinformatics Institute	Jul 14, 2011
GSE34493	A zebrafish model of intrahepatic cholangiocarcinoma by dual expression of hepatitis B virus X and hepatitis C virus core protein in liver	Expression profiling by high throughput sequencing	Danio rerio	4	TXT SRA Run Selector	Wangta Liu	Dec 02, 2014
GSE34743	Ribosome profiling of early zebrafish embryos -- miRNA-mediated regulation during embryogenesis causes translational repression before mRNA decay	Expression profiling by high throughput sequencing	Danio rerio	22	BED SRA Run Selector	Antonio J. Giraldez	Mar 15, 2012
GSE37453	Extensive alternative polyadenylation during zebrafish development	Expression profiling by high throughput sequencing	Danio rerio	14	BED BW TXT SRA Run Selector	Igor Ulitsky	Jun 17, 2012
GSE38042	The zebrafish embryo as an alternative model for the evaluation of liver toxicity using histopathology and expression profiling	Expression profiling by high throughput sequencing	Danio rerio	2	TXT SRA Run Selector	Marja Driessen	May 15, 2015
GSE38575	Whole Transcriptome RNA Sequencing Detects Multiple 1a,25-Dihydroxyvitamin D3-Sensitive Metabolic Pathways in Zebrafish Embryos	Expression profiling by high throughput sequencing	Danio rerio	40	TXT SRA Run Selector	Yuji Zhang	Jun 29, 2012
GSE38786	Id2a knockdown in zebrafish retina	Expression profiling by high throughput sequencing	Danio rerio	4	TXT SRA Run Selector	Taejoon Kwon	Aug 27, 2012
GSE39703	Transcriptomic analysis of zebrafish during development and homeostasis	Expression profiling by high throughput sequencing	Danio rerio	16	TXT SRA Run Selector	olivier armant	Jul 27, 2013
GSE40745	Transcriptomic analyses of Myc-induced zebrafish liver cancer	Expression profiling by high throughput sequencing	Danio rerio	8	TXT SRA Run Selector	Weiling Zheng	Apr 02, 2013
GSE41373	Zebrafish (Danio rerio) catecholaminergic neuron RNA-seq based transcript profiles	Expression profiling by high throughput sequencing	Danio rerio	12	XLS XLSX SRA Run Selector	Wolfgang - Driever	Oct 15, 2012
GSE41988	Targeting oncogene expression to endothelial cells induces proliferation of the myelo-erythroid lineage by repressing the notch pathway	Expression profiling by high throughput sequencing	Danio rerio	3	TXT SRA Run Selector	marina mione	Sep 19, 2013
GSE42846	Marker gene discovery for Staphylococcus epidermidis infection in zebrafish embryos (RNA-Seq)	Expression profiling by high throughput sequencing	Danio rerio	8	TSV SRA Run Selector	Wouter Veneman	Apr 01, 2013