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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter			Bacteroides fragilis
GSE220692	Measuring the effect of deoxycholate on Bacteroides fragilis gene expression	Expression profiling by high throughput sequencing	Bacteroides fragilis	9		TXT	Sean Crosson	Aug 01, 2023
GSE122256	Detection of carbohydrate-active enzyme genes in the rumen of young lambs	Genome variation profiling by array	Acetivibrio clariflavus Acetivibrio thermocellus Agathobacter rectalis Bacteroides fragilis Bacteroides ovatus Bacteroides sp. Bacteroides thetaiotaomicron Bacteroides xylanisolvens Bifidobacterium adolescentis Bifidobacterium animalis Bifidobacterium longum Butyrivibrio fibrisolvens Butyrivibrio hungatei Cellulomonas fimi Cellulomonas flavigena Cellulosilyticum ruminicola Clostridioides difficile Clostridium acetobutylicum Clostridium beijerinckii Clostridium cellulovorans Enterobacter sp. Enterococcus faecium Epidinium caudatum Epidinium ecaudatum Eudiplodinium maggii Fibrobacter intestinalis Fibrobacter succinogenes Lachnospira eligens Lactococcus lactis Levilactobacillus brevis Limosilactobacillus fermentum Microbiota Neocallimastix frontalis Neocallimastix patriciarum Orpinomyces joyonii Orpinomyces sp. Piromyces communis Piromyces rhizinflatus Piromyces sp. Piromyces sp. 'equi' Polyplastron multivesiculatum Pseudobacteroides cellulosolvens Pseudobutyrivibrio xylanivorans Roseburia hominis Roseburia intestinalis Ruminiclostridium cellulolyticum Ruminococcus albus Ruminococcus champanellensis Ruminococcus flavefaciens Ruminococcus sp. Segatella bryantii Selenomonas ruminantium Xylanibacter ruminicola [Eubacterium] cellulosolvens uncultured Neocallimastigales	6		TXT	Evelyne Forano	Oct 01, 2019
GSE104575	Role of BmoR in Bacteroides fragilis response to oxidative stress	Expression profiling by array	Bacteroides fragilis	8		CEL CHP	Felipe Lopes Teixeira	Feb 01, 2018
GSE107550	The FibroChip, a functional DNA microarray to monitor cellulolysis and hemicellulolysis activities of rumen microbiota	Expression profiling by array Other	Acetivibrio clariflavus Acetivibrio thermocellus Agathobacter rectalis Bacteroides fragilis Bacteroides ovatus Bacteroides sp. Bacteroides thetaiotaomicron Bacteroides xylanisolvens Bacteroides xylanisolvens XB1A Bifidobacterium adolescentis Bifidobacterium animalis Bifidobacterium longum Butyrivibrio fibrisolvens Butyrivibrio hungatei Cellulomonas fimi Cellulomonas flavigena Cellulosilyticum ruminicola Clostridioides difficile Clostridium acetobutylicum Clostridium beijerinckii Clostridium cellulovorans Enterobacter sp. Enterococcus faecium Epidinium caudatum Epidinium ecaudatum Escherichia coli K-12 Eudiplodinium maggii Fibrobacter intestinalis Fibrobacter succinogenes Fibrobacter succinogenes subsp. succinogenes S85 Lachnospira eligens Lactococcus lactis Levilactobacillus brevis Limosilactobacillus fermentum Neocallimastix frontalis Neocallimastix patriciarum Orpinomyces joyonii Orpinomyces sp. Piromyces communis Piromyces rhizinflatus Piromyces sp. Piromyces sp. 'equi' Polyplastron multivesiculatum Pseudobacteroides cellulosolvens Pseudobutyrivibrio xylanivorans Roseburia hominis Roseburia intestinalis Ruminiclostridium cellulolyticum Ruminococcus albus Ruminococcus champanellensis Ruminococcus flavefaciens Ruminococcus sp. Segatella bryantii Selenomonas ruminantium Xylanibacter ruminicola [Eubacterium] cellulosolvens bovine gut metagenome uncultured Neocallimastigales	14		TXT	Sophie Comtet-Marre	Dec 01, 2017
GSE69071	Identification of the genetic loci associating with the OMV formation by means of transcriptome analysis on the isogenic BF2766 mutants in B. fragilis strain YCH46	Expression profiling by array	Bacteroides fragilis Bacteroides fragilis YCH46	4		CALLS PAIR	Imaohji Haruyuki	Feb 21, 2016
GSE44752	The human Gut Chip “HuGChip”, an explorative phylogenetic microarray for determining gut microbiome diversity at Family level	Expression profiling by array	Bacteroides fragilis Blautia coccoides Escherichia coli Lactobacillus acidophilus [Clostridium] leptum human gut metagenome uncultured bacterium	4		TXT	Nicolas Parisot	Mar 01, 2013
GSE27439	Identification of the regulatory circuit of PhoB in Bacteroides fragilis strain YCH46	Expression profiling by array	Bacteroides fragilis Bacteroides fragilis YCH46	4		CALLS PAIR	Haruyuki Nakayama-Imaohji	Feb 22, 2011
GSE4583	Bacteroides fragilis oxidative stress	Expression profiling by array	Bacteroides fragilis Bacteroides fragilis NCTC 9343	27			Charles Jeffrey Smith	Dec 30, 2007