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| Status |
Public on Feb 01, 2018 |
| Title |
Role of BmoR in Bacteroides fragilis response to oxidative stress |
| Organism |
Bacteroides fragilis |
| Experiment type |
Expression profiling by array
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| Summary |
Comparison of transcriptional profile of wild-type and bmoR mutant strains of Bacteroides fragilis grown under anaerobic conditions and after exposure to atmospheric oxygen for 1 hour.
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| Overall design |
This is an eight chip study using two biological replicates of each strain under anaerobic or oxygen exposure conditions. Anaerobic grown wild-type strain was used as reference for alterations in gene expression.
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| Contributor(s) |
Teixeira FL, Rocha ER, Smith CJ |
| Citation(s) |
30258073 |
| Submission date |
Oct 03, 2017 |
| Last update date |
Jul 25, 2021 |
| Contact name |
Felipe Lopes Teixeira |
| Phone |
+55-21-2560-8344
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| Organization name |
Universidade Federal do Rio de Janeiro
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| Department |
Microbiologia Médica
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| Street address |
Av. Carlos Chagas Filho 373
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| City |
Rio de Janeiro |
| State/province |
Rio de Janeiro |
| ZIP/Postal code |
21941902 |
| Country |
Brazil |
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| Platforms (1) |
| GPL24065 |
[Bfragilis] Affymetrix Bacteroides fragilis Array |
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| Samples (8)
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| GSM2803541 |
B. fragilis 638R, anaerobic, biological rep1 |
| GSM2803542 |
B. fragilis 638R, anaerobic, biological rep2 |
| GSM2803543 |
B. fragilis 638R, O2 exposed, biological rep1 |
| GSM2803544 |
B. fragilis 638R, O2 exposed, biological rep2 |
| GSM2803545 |
B. fragilis bmoR mutant, anaerobic, biological rep1 |
| GSM2803546 |
B. fragilis bmoR mutant, anaerobic, biological rep2 |
| GSM2803547 |
B. fragilis bmoR mutant, O2 exposed, biological rep1 |
| GSM2803548 |
B. fragilis bmoR mutant, O2 exposed, biological rep2 |
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| Relations |
| BioProject |
PRJNA413089 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE104575_RAW.tar |
15.4 Mb |
(http)(custom) |
TAR (of CEL, CHP) |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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