GEO Browser - GEO

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40 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Nematostella vectensis
GSE70185	The mid-developmental transition and the evolution of animal body plans	Expression profiling by high throughput sequencing	Amphimedon queenslandica Caenorhabditis elegans Danio rerio Drosophila melanogaster Hypsibius dujardini Mnemiopsis leidyi Nematostella vectensis Platynereis dumerilii Schmidtea polychroa Strongylocentrotus purpuratus	1143	XLSX PDF	Itai Yanai	Feb 18, 2016
GSE95723	Cnidarian cell type diversity revealed by whole-organism single-cell RNA-seq analysis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Nematostella vectensis	8	XLSX TXT BW SRA Run Selector	Arnau Sebe-Pedros	May 31, 2018
GSE144203	Unravelling the developmental and functional significance of an ancient Argonaute duplication	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Nematostella vectensis	30	XLSX SRA Run Selector	Arie Fridrich	Oct 13, 2020
GSE12578	The Early Origins and Evolution of microRNAs and piRNAs in Animals	Non-coding RNA profiling by high throughput sequencing	Amphimedon queenslandica Monosiga brevicollis Nematostella vectensis Trichoplax adhaerens	17	TXT SRA Run Selector	andrew grimson	Oct 01, 2008
GSE19824	Genome-wide evolutionary analysis of eukaryotic DNA methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Apis mellifera Bombyx mori Chlorella variabilis Ciona intestinalis Coprinopsis cinerea Drosophila melanogaster Laccaria bicolor Nematostella vectensis Oryza sativa Phycomyces blakesleeanus Physcomitrium patens Postia placenta Selaginella moellendorffii Tetraodon nigroviridis Tribolium castaneum Uncinocarpus reesii Volvox carteri	33	TXT GFF SRA Run Selector	Toshiro Nishimura	Apr 15, 2010
GSE45588	Mechanisms of tentacle morphogenesis in the sea anemone, Nematostella vectensis	Expression profiling by array	Nematostella vectensis	6	TXT	Chris W Seidel	May 01, 2013
GSE58769	Early and late response of Nematostella vectensis transcriptome to heavy metals	Expression profiling by high throughput sequencing	Nematostella vectensis	16	TXT SRA Run Selector	Tamar Lotan	Dec 22, 2015
GSE71086	Nematostella vectensis high resolution developmental transcriptomic time-course	Expression profiling by high throughput sequencing	Nematostella vectensis	123	TXT FASTA SRA Run Selector	Itai Yanai	Feb 18, 2016
GSE94526	Post transcriptional modifications of miRNAs in the cnidarian Nematostella vectensis	Non-coding RNA profiling by high throughput sequencing	Nematostella vectensis	30	TXT SRA Run Selector	vengamanaidu modepalli	Aug 15, 2017
GSE101604	Antagonistic BMP–cWNT signaling in the cnidarian Nematostella vectensis reveals insight into the evolution of mesoderm	Expression profiling by high throughput sequencing	Nematostella vectensis	9	TXT SRA Run Selector	david k Simmons	Jul 19, 2017
GSE110148	The methyltransferase HEN1 is required in Nematostella vectensis for microRNA and piRNA stability as well as larval metamorphosis	Non-coding RNA profiling by high throughput sequencing	Nematostella vectensis	8	TXT SRA Run Selector	vengamanaidu modepalli	Jan 01, 2019
GSE115184	The methyltransferase HEN1 is required for microRNA and piRNA stability as well as larval metamorphosis in Nematostella vectensis	Non-coding RNA profiling by high throughput sequencing	Nematostella vectensis	12	TXT SRA Run Selector	vengamanaidu modepalli	Jan 01, 2019
GSE124016	Convergent evolution of a vertebrate-like methylome in a marine sponge	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Amphimedon queenslandica Mnemiopsis leidyi Nematostella vectensis Sycon ciliatum	36	TXT CGMAP SRA Run Selector	Alex de Mendoza	Aug 02, 2019
GSE132202	Transcriptional remodeling upon light removal in a model cnidarian: losses and gains in gene expression	Expression profiling by high throughput sequencing	Nematostella vectensis	136	TXT SRA Run Selector	Whitney at Leach	Jun 06, 2019
GSE132526	Decoupling behavioral and transcriptional responses to color in an eyeless cnidarian	Expression profiling by high throughput sequencing	Nematostella vectensis	96	TXT SRA Run Selector	Whitney at Leach	Jun 12, 2019
GSE135498	Sequencing short capped RNAs captures acute transcription initiation and identifies promoter and distal regulatory elements across eukaryotes from total RNA	Other	Capsaspora owczarzaki Homo sapiens Mus musculus Nematostella vectensis Neurospora crassa Oryza sativa	40	TXT BW BIGWIG SRA Run Selector	Christopher Benner	Sep 16, 2019
GSE143861	Global temporal gene expression of Nematostella vectensis in-situ	Expression profiling by high throughput sequencing	Nematostella vectensis	66	TXT SRA Run Selector	Whitney at Leach	Jan 18, 2020
GSE144080	Gene expression during recovery from different forms of trauma in the sea anemone, Nematostella vectensis	Expression profiling by high throughput sequencing	Nematostella vectensis	84	TXT SRA Run Selector	Whitney at Leach	Jan 23, 2020
GSE144104	Geographical temperature stress in the sea anemone Nematostella vectensis	Expression profiling by high throughput sequencing	Nematostella vectensis	52	TXT SRA Run Selector	Whitney at Leach	Jan 24, 2020
GSE154476	Sea anemone mesentery muscle profiling [bulk RNA-seq]	Expression profiling by high throughput sequencing	Nematostella vectensis	4	TXT SRA Run Selector	Alison G Cole	Dec 31, 2022